RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 SEC23AQ15436 765 aa13.97□□□□□ -0.17
PDGFB-203ENST00000440375 FSCN1Q16658 493 aaKnown RBP13.97□□□□□ -0.17
PDGFB-203ENST00000440375 ASPRV1Q53RT3 343 aa13.97□□□□□ -0.17
PDGFB-203ENST00000440375 CCDC178Q5BJE1 867 aa13.97□□□□□ -0.17
PDGFB-203ENST00000440375 ADGRF4Q8IZF3 695 aa13.97□□□□□ -0.17
PDGFB-203ENST00000440375 VTI1AQ96AJ9 217 aa13.97□□□□□ -0.17
PDGFB-203ENST00000440375 TOX2Q96NM4 488 aa13.97□□□□□ -0.17
PDGFB-203ENST00000440375 UBAC1Q9BSL1 405 aa13.97□□□□□ -0.17
PDGFB-203ENST00000440375 CNNM2Q9H8M5 875 aa13.97□□□□□ -0.17
PDGFB-203ENST00000440375 ADD3Q9UEY8 706 aaKnown RBP13.97□□□□□ -0.17
PDGFB-203ENST00000440375 EYSQ5T1H1 3165 aa13.97□□□□□ -0.17
PDGFB-203ENST00000440375 CDH23Q9H251 3354 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 GRIN2DO15399 1336 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 ARVCFO00192 962 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 EDNRBP24530 442 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 QRICH1Q2TAL8 776 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 IFIT1BQ5T764 474 aaKnown RBP13.96□□□□□ -0.17
PDGFB-203ENST00000440375 IQSEC1Q6DN90 963 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 STOX1Q6ZVD7 989 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 SKAP1Q86WV1 359 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 FAM126BQ8IXS8 530 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 STAG2Q8N3U4 1231 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 TBC1D5Q92609 795 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 SENP2Q9HC62 589 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 MTMR10Q9NXD2 777 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 COL20A1Q9P218 1284 aa13.96□□□□□ -0.17
PDGFB-203ENST00000440375 SGSM2O43147 1006 aa13.95□□□□□ -0.18
PDGFB-203ENST00000440375 PARP1P09874 1014 aaKnown RBP13.95□□□□□ -0.18
PDGFB-203ENST00000440375 PSMC6P62333 389 aa13.95□□□□□ -0.18
PDGFB-203ENST00000440375 FPGSQ05932 587 aa13.95□□□□□ -0.18
PDGFB-203ENST00000440375 SLC35G1Q2M3R5 365 aa13.95□□□□□ -0.18
PDGFB-203ENST00000440375 DUSP28Q4G0W2 176 aa13.95□□□□□ -0.18
PDGFB-203ENST00000440375 WDR11Q9BZH6 1224 aa13.95□□□□□ -0.18
PDGFB-203ENST00000440375 AP5M1Q9H0R1 490 aa13.95□□□□□ -0.18
PDGFB-203ENST00000440375 JMJD4Q9H9V9 463 aa13.95□□□□□ -0.18
PDGFB-203ENST00000440375 PNMA2Q9UL42 364 aa13.95□□□□□ -0.18
PDGFB-203ENST00000440375 A0A0C4DFX4 3053 aa13.94□□□□□ -0.18
PDGFB-203ENST00000440375 MROH7Q68CQ1 1323 aa13.94□□□□□ -0.18
PDGFB-203ENST00000440375 RBM47A0AV96 593 aaKnown RBP13.94□□□□□ -0.18
PDGFB-203ENST00000440375 DHX16O60231 1041 aaKnown RBP13.94□□□□□ -0.18
PDGFB-203ENST00000440375 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
PDGFB-203ENST00000440375 PDE4DQ08499 809 aa13.94□□□□□ -0.18
PDGFB-203ENST00000440375 SLC43A3Q8NBI5 491 aa13.94□□□□□ -0.18
PDGFB-203ENST00000440375 RUFY2Q8WXA3 655 aa13.94□□□□□ -0.18
PDGFB-203ENST00000440375 COPS5Q92905 334 aa13.94□□□□□ -0.18
PDGFB-203ENST00000440375 RNPC3Q96LT9 517 aaKnown RBP13.94□□□□□ -0.18
PDGFB-203ENST00000440375 FAM161BQ96MY7 647 aa13.94□□□□□ -0.18
PDGFB-203ENST00000440375 PPP1R12CQ9BZL4 782 aa13.94□□□□□ -0.18
PDGFB-203ENST00000440375 VAT1LQ9HCJ6 419 aa13.94□□□□□ -0.18
PDGFB-203ENST00000440375 ABCB11O95342 1321 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 LOC102724159A0A0B4J2E5 919 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 E7EWF7 191 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 OPLAHO14841 1288 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 ARIH2O95376 493 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 TIMP1P01033 207 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 CD4P01730 458 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 ANTXR2P58335 489 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 ITGA7Q13683 1181 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 PWP2Q15269 919 aaKnown RBP13.93□□□□□ -0.18
PDGFB-203ENST00000440375 CHST3Q7LGC8 479 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 DNERQ8NFT8 737 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 SYTL5Q8TDW5 730 aaPredicted RBP13.93□□□□□ -0.18
PDGFB-203ENST00000440375 GUCD1Q96NT3 240 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 MAD2L2Q9UI95 211 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 Q9Y3F1 56 aa13.93□□□□□ -0.18
PDGFB-203ENST00000440375 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
PDGFB-203ENST00000440375 UMODL1Q5DID0 1318 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 KLRF2D3W0D1 207 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 CABYRO75952 493 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 CSF2RAP15509 400 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 CYP2C18P33260 490 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 COL9A3Q14050 684 aaPredicted RBP13.92□□□□□ -0.18
PDGFB-203ENST00000440375 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 MFSD5Q6N075 450 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 C16orf59Q7L2K0 433 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 FBXO11Q86XK2 927 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 OR6J1Q8NGC5 347 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 PPP1R13LQ8WUF5 828 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 TAAR1Q96RJ0 339 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 TRPV6Q9H1D0 765 aa13.92□□□□□ -0.18
PDGFB-203ENST00000440375 RBM8AQ9Y5S9 174 aaKnown RBP13.92□□□□□ -0.18
PDGFB-203ENST00000440375 UNC80Q8N2C7 3258 aa13.91□□□□□ -0.18
PDGFB-203ENST00000440375 PALM3A6NDB9 673 aaPredicted RBP13.91□□□□□ -0.18
PDGFB-203ENST00000440375 IFIT3O14879 490 aaKnown RBP13.91□□□□□ -0.18
PDGFB-203ENST00000440375 ZEB2O60315 1214 aa13.91□□□□□ -0.18
PDGFB-203ENST00000440375 B4GALT4O60513 344 aa13.91□□□□□ -0.18
PDGFB-203ENST00000440375 PURAQ00577 322 aaKnown RBP13.91□□□□□ -0.18
PDGFB-203ENST00000440375 TRDNQ13061 729 aa13.91□□□□□ -0.18
PDGFB-203ENST00000440375 GRM4Q14833 912 aa13.91□□□□□ -0.18
PDGFB-203ENST00000440375 FAM109BQ6ICB4 259 aaPredicted RBP13.91□□□□□ -0.18
PDGFB-203ENST00000440375 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
PDGFB-203ENST00000440375 MB21D2Q8IYB1 491 aaPredicted RBP13.91□□□□□ -0.18
PDGFB-203ENST00000440375 SCFD2Q8WU76 684 aa13.91□□□□□ -0.18
PDGFB-203ENST00000440375 MAP4K1Q92918 833 aa13.91□□□□□ -0.18
PDGFB-203ENST00000440375 MTMR8Q96EF0 704 aa13.91□□□□□ -0.18
PDGFB-203ENST00000440375 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.91□□□□□ -0.181e-9■■■■□ 25.1
PDGFB-203ENST00000440375 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
PDGFB-203ENST00000440375 STXBP5LQ9Y2K9 1186 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms