RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SLC12A7Q9Y666 1083 aa27.45■■□□□ 1.98
VARS-217ENST00000440048 LOC102724159A0A0B4J2E5 919 aa27.44■■□□□ 1.98
VARS-217ENST00000440048 ADCY6O43306 1168 aa27.44■■□□□ 1.98
VARS-217ENST00000440048 HMGB1P09429 215 aaKnown RBP27.44■■□□□ 1.98
VARS-217ENST00000440048 CALM1P0DP23 149 aa27.44■■□□□ 1.98
VARS-217ENST00000440048 CALM2P0DP24 149 aa27.44■■□□□ 1.98
VARS-217ENST00000440048 CALM3P0DP25 149 aa27.44■■□□□ 1.98
VARS-217ENST00000440048 RXRAP19793 462 aa27.44■■□□□ 1.98
VARS-217ENST00000440048 PWP2Q15269 919 aaKnown RBP27.44■■□□□ 1.98
VARS-217ENST00000440048 MCF2L2Q86YR7 1114 aa27.44■■□□□ 1.98
VARS-217ENST00000440048 RAB11FIP4Q86YS3 637 aa27.44■■□□□ 1.98
VARS-217ENST00000440048 PCDHA1Q9Y5I3 950 aa27.44■■□□□ 1.98
VARS-217ENST00000440048 DUSP11O75319 330 aaKnown RBP27.43■■□□□ 1.98
VARS-217ENST00000440048 HABP4Q5JVS0 413 aaKnown RBP27.43■■□□□ 1.98
VARS-217ENST00000440048 EEPD1Q7L9B9 569 aa27.43■■□□□ 1.98
VARS-217ENST00000440048 DNERQ8NFT8 737 aa27.43■■□□□ 1.98
VARS-217ENST00000440048 JAKMIP1Q96N16 626 aaKnown RBP27.43■■□□□ 1.98
VARS-217ENST00000440048 SPZ1Q9BXG8 430 aa27.43■■□□□ 1.98
VARS-217ENST00000440048 SYNRGQ9UMZ2 1314 aa27.42■■□□□ 1.98
VARS-217ENST00000440048 PNMA6FA0A0J9YX94 578 aa27.42■■□□□ 1.98
VARS-217ENST00000440048 OPLAHO14841 1288 aa27.42■■□□□ 1.98
VARS-217ENST00000440048 EPB41L2O43491 1005 aaKnown RBP27.42■■□□□ 1.98
VARS-217ENST00000440048 ADAMTS4O75173 837 aa27.42■■□□□ 1.98
VARS-217ENST00000440048 PLEKHA8P1O95397 391 aa27.42■■□□□ 1.98
VARS-217ENST00000440048 GNAQP50148 359 aa27.42■■□□□ 1.98
VARS-217ENST00000440048 RNF180Q86T96 592 aa27.42■■□□□ 1.98
VARS-217ENST00000440048 FBXO16Q8IX29 292 aaPredicted RBP27.42■■□□□ 1.98
VARS-217ENST00000440048 SYTL5Q8TDW5 730 aaPredicted RBP27.42■■□□□ 1.98
VARS-217ENST00000440048 PIBF1Q8WXW3 757 aa27.42■■□□□ 1.98
VARS-217ENST00000440048 LZTS2Q9BRK4 669 aa27.42■■□□□ 1.98
VARS-217ENST00000440048 VTA1Q9NP79 307 aa27.42■■□□□ 1.98
VARS-217ENST00000440048 CPA1P15085 419 aa27.41■■□□□ 1.98
VARS-217ENST00000440048 SMARCA1P28370 1054 aa27.41■■□□□ 1.98
VARS-217ENST00000440048 ADCYAP1R1P41586 468 aa27.41■■□□□ 1.98
VARS-217ENST00000440048 LRRC26Q2I0M4 334 aa27.41■■□□□ 1.98
VARS-217ENST00000440048 TAPT1Q6NXT6 567 aa27.41■■□□□ 1.98
VARS-217ENST00000440048 SRBD1Q8N5C6 995 aaKnown RBP27.41■■□□□ 1.98
VARS-217ENST00000440048 PDGFCQ9NRA1 345 aa27.41■■□□□ 1.98
VARS-217ENST00000440048 COL20A1Q9P218 1284 aa27.41■■□□□ 1.98
VARS-217ENST00000440048 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.4■■□□□ 1.98
VARS-217ENST00000440048 TNFAIP2Q03169 654 aa27.4■■□□□ 1.98
VARS-217ENST00000440048 TRAF1Q13077 416 aa27.4■■□□□ 1.98
VARS-217ENST00000440048 APOA5Q6Q788 366 aa27.4■■□□□ 1.98
VARS-217ENST00000440048 SYNE3Q6ZMZ3 975 aa27.4■■□□□ 1.98
VARS-217ENST00000440048 MICU3Q86XE3 530 aa27.4■■□□□ 1.98
VARS-217ENST00000440048 C7orf61Q8IZ16 206 aa27.4■■□□□ 1.98
VARS-217ENST00000440048 FANCBQ8NB91 859 aa27.4■■□□□ 1.98
VARS-217ENST00000440048 TAAR1Q96RJ0 339 aa27.4■■□□□ 1.98
VARS-217ENST00000440048 USP26Q9BXU7 913 aa27.4■■□□□ 1.98
VARS-217ENST00000440048 BRPF3Q9ULD4 1205 aa27.4■■□□□ 1.98
VARS-217ENST00000440048 CFBP00751 764 aa27.39■■□□□ 1.98
VARS-217ENST00000440048 EDNRBP24530 442 aa27.39■■□□□ 1.98
VARS-217ENST00000440048 BLOC1S2Q6QNY1 142 aa27.39■■□□□ 1.98
VARS-217ENST00000440048 CMTR1Q8N1G2 835 aaKnown RBP27.39■■□□□ 1.98
VARS-217ENST00000440048 KLHDC9Q8NEP7 349 aa27.39■■□□□ 1.98
VARS-217ENST00000440048 RRP36Q96EU6 259 aaKnown RBP27.39■■□□□ 1.98
VARS-217ENST00000440048 MPHOSPH6Q99547 160 aaKnown RBP27.39■■□□□ 1.98
VARS-217ENST00000440048 UPF3AQ9H1J1 476 aaKnown RBP27.39■■□□□ 1.98
VARS-217ENST00000440048 PHF24Q9UPV7 400 aa27.39■■□□□ 1.98
VARS-217ENST00000440048 COLQQ9Y215 455 aaPredicted RBP27.39■■□□□ 1.98
VARS-217ENST00000440048 HSD17B4P51659 736 aa27.38■■□□□ 1.97
VARS-217ENST00000440048 ATN1P54259 1190 aaPredicted RBP27.38■■□□□ 1.97
VARS-217ENST00000440048 GJA9P57773 515 aa27.38■■□□□ 1.97
VARS-217ENST00000440048 GHRHRQ02643 423 aa27.38■■□□□ 1.97
VARS-217ENST00000440048 PDE4DQ08499 809 aa27.38■■□□□ 1.97
VARS-217ENST00000440048 IQSEC1Q6DN90 963 aa27.38■■□□□ 1.97
VARS-217ENST00000440048 FERMT2Q96AC1 680 aa27.38■■□□□ 1.97
VARS-217ENST00000440048 MYADML2A6NDP7 307 aa27.37■■□□□ 1.97
VARS-217ENST00000440048 B4DLN1 442 aa27.37■■□□□ 1.97
VARS-217ENST00000440048 SMPD1P17405 629 aa27.37■■□□□ 1.97
VARS-217ENST00000440048 MRPL12P52815 198 aaKnown RBP27.37■■□□□ 1.97
VARS-217ENST00000440048 IRX5P78411 483 aaPredicted RBP27.37■■□□□ 1.97
VARS-217ENST00000440048 TMTC3Q6ZXV5 915 aa27.37■■□□□ 1.97
VARS-217ENST00000440048 NOL8Q76FK4 1167 aaKnown RBP27.37■■□□□ 1.97
VARS-217ENST00000440048 TSEN34Q9BSV6 310 aaKnown RBP27.37■■□□□ 1.97
VARS-217ENST00000440048 GNEQ9Y223 722 aaKnown RBP27.37■■□□□ 1.97
VARS-217ENST00000440048 ZBTB43O43298 467 aa27.36■■□□□ 1.97
VARS-217ENST00000440048 C6orf222P0C671 652 aaPredicted RBP27.36■■□□□ 1.97
VARS-217ENST00000440048 FGD1P98174 961 aa27.36■■□□□ 1.97
VARS-217ENST00000440048 TMEM63BQ5T3F8 832 aa27.36■■□□□ 1.97
VARS-217ENST00000440048 CCSAPQ6IQ19 270 aaPredicted RBP27.36■■□□□ 1.97
VARS-217ENST00000440048 Q6ZUG5 572 aa27.36■■□□□ 1.97
VARS-217ENST00000440048 NSUN6Q8TEA1 469 aaKnown RBP27.36■■□□□ 1.97
VARS-217ENST00000440048 RMDN3Q96TC7 470 aa27.36■■□□□ 1.97
VARS-217ENST00000440048 SPC25Q9HBM1 224 aa27.36■■□□□ 1.97
VARS-217ENST00000440048 RANBP2P49792 3224 aaKnown RBP27.35■■□□□ 1.97
VARS-217ENST00000440048 KLF18A0A0U1RQI7 1052 aa27.35■■□□□ 1.97
VARS-217ENST00000440048 PTGS1P23219 599 aa27.35■■□□□ 1.97
VARS-217ENST00000440048 RPS6KB1P23443 525 aa27.35■■□□□ 1.97
VARS-217ENST00000440048 PSMA5P28066 241 aa27.35■■□□□ 1.97
VARS-217ENST00000440048 CST5P28325 142 aaPredicted RBP27.35■■□□□ 1.97
VARS-217ENST00000440048 KCNA10Q16322 511 aa27.35■■□□□ 1.97
VARS-217ENST00000440048 SLC39A5Q6ZMH5 540 aa27.35■■□□□ 1.97
VARS-217ENST00000440048 SAMD3Q8N6K7 520 aa27.35■■□□□ 1.97
VARS-217ENST00000440048 MAP3K20Q9NYL2 800 aaKnown RBP27.35■■□□□ 1.97
VARS-217ENST00000440048 SEC63Q9UGP8 760 aaKnown RBP27.35■■□□□ 1.97
VARS-217ENST00000440048 RBM47A0AV96 593 aaKnown RBP27.34■■□□□ 1.97
VARS-217ENST00000440048 CTAGE5O15320 804 aa27.34■■□□□ 1.97
VARS-217ENST00000440048 CASTP20810 708 aaKnown RBP27.34■■□□□ 1.97
VARS-217ENST00000440048 HOXA13P31271 388 aaPredicted RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms