RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 CALML3P27482 149 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 GJA8P48165 433 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 RGS19P49795 217 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 METAP2P50579 478 aaKnown RBP eCLIP12.13□□□□□ -0.47
UBE2F-213ENST00000439780 RCAN1P53805 252 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 LHX8Q68G74 356 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 SYTL5Q8TDW5 730 aaPredicted RBP12.13□□□□□ -0.47
UBE2F-213ENST00000439780 RRP36Q96EU6 259 aaKnown RBP12.13□□□□□ -0.47
UBE2F-213ENST00000439780 KATNBL1Q9H079 304 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 CRISPLD2Q9H0B8 497 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 ALDH8A1Q9H2A2 487 aaPredicted RBP12.13□□□□□ -0.47
UBE2F-213ENST00000439780 NCOA5Q9HCD5 579 aaKnown RBP12.13□□□□□ -0.47
UBE2F-213ENST00000439780 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
UBE2F-213ENST00000439780 MRPL11Q9Y3B7 192 aaKnown RBP12.13□□□□□ -0.47
UBE2F-213ENST00000439780 NID2Q14112 1375 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 PPFIA3O75145 1194 aa12.12□□□□□ -0.47
UBE2F-213ENST00000439780 CNGA1P29973 690 aa12.12□□□□□ -0.47
UBE2F-213ENST00000439780 CCT2P78371 535 aaKnown RBP12.12□□□□□ -0.47
UBE2F-213ENST00000439780 GHRHRQ02643 423 aa12.12□□□□□ -0.47
UBE2F-213ENST00000439780 NTRK3Q16288 839 aa12.12□□□□□ -0.47
UBE2F-213ENST00000439780 ANO1Q5XXA6 986 aa12.12□□□□□ -0.47
UBE2F-213ENST00000439780 ARMCX2Q7L311 632 aa12.12□□□□□ -0.47
UBE2F-213ENST00000439780 MSL3Q8N5Y2 521 aaKnown RBP12.12□□□□□ -0.47
UBE2F-213ENST00000439780 TAAR1Q96RJ0 339 aa12.12□□□□□ -0.47
UBE2F-213ENST00000439780 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.12□□□□□ -0.47
UBE2F-213ENST00000439780 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
UBE2F-213ENST00000439780 SYNGAP1Q96PV0 1343 aa12.11□□□□□ -0.47
UBE2F-213ENST00000439780 TNRC18O15417 2968 aaPredicted RBP12.11□□□□□ -0.47
UBE2F-213ENST00000439780 MCM3APO60318 1980 aa12.11□□□□□ -0.47
UBE2F-213ENST00000439780 CFBP00751 764 aa12.11□□□□□ -0.47
UBE2F-213ENST00000439780 HOXA13P31271 388 aaPredicted RBP12.11□□□□□ -0.47
UBE2F-213ENST00000439780 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
UBE2F-213ENST00000439780 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
UBE2F-213ENST00000439780 HSD17B4P51659 736 aa12.11□□□□□ -0.47
UBE2F-213ENST00000439780 AK2P54819 239 aa12.11□□□□□ -0.47
UBE2F-213ENST00000439780 MCF2L2Q86YR7 1114 aa12.11□□□□□ -0.47
UBE2F-213ENST00000439780 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
UBE2F-213ENST00000439780 GPKOWQ92917 476 aaPredicted RBP eCLIP12.11□□□□□ -0.472e-6■■■■■ 37.1
UBE2F-213ENST00000439780 ZNF274Q96GC6 653 aaPredicted RBP12.11□□□□□ -0.47
UBE2F-213ENST00000439780 C22orf23Q9BZE7 217 aa12.11□□□□□ -0.47
UBE2F-213ENST00000439780 TPCN1Q9ULQ1 816 aa12.11□□□□□ -0.47
UBE2F-213ENST00000439780 ASB14A6NK59 587 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 SEPT4O43236 478 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 ADCY6O43306 1168 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 DTNBO60941 627 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 TFRCP02786 760 aaKnown RBP12.1□□□□□ -0.47
UBE2F-213ENST00000439780 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
UBE2F-213ENST00000439780 NEK4P51957 841 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 STK3Q13188 491 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 ACVR2BQ13705 512 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 PPP2R5BQ15173 497 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 TMEM63BQ5T3F8 832 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 WWC2Q6AWC2 1192 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 TYW1BQ6NUM6 668 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 UBE2Q1Q7Z7E8 422 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 PHKBQ93100 1093 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 LENG1Q96BZ8 264 aaPredicted RBP12.1□□□□□ -0.47
UBE2F-213ENST00000439780 MAF1Q9H063 256 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 SEC63Q9UGP8 760 aaKnown RBP12.1□□□□□ -0.47
UBE2F-213ENST00000439780 DDX20Q9UHI6 824 aaKnown RBP12.1□□□□□ -0.47
UBE2F-213ENST00000439780 NRBP1Q9UHY1 535 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 OGDHLQ9ULD0 1010 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 CNPY2Q9Y2B0 182 aa12.1□□□□□ -0.47
UBE2F-213ENST00000439780 MKI67P46013 3256 aaKnown RBP12.1□□□□□ -0.47
UBE2F-213ENST00000439780 CCDC196A0A1B0GTZ2 297 aa12.09□□□□□ -0.47
UBE2F-213ENST00000439780 LARGE1O95461 756 aa12.09□□□□□ -0.47
UBE2F-213ENST00000439780 PTGS1P23219 599 aa12.09□□□□□ -0.47
UBE2F-213ENST00000439780 EDNRBP24530 442 aa12.09□□□□□ -0.47
UBE2F-213ENST00000439780 TRAF1Q13077 416 aa12.09□□□□□ -0.47
UBE2F-213ENST00000439780 PKN1Q16512 942 aa12.09□□□□□ -0.47
UBE2F-213ENST00000439780 TAPT1Q6NXT6 567 aa12.09□□□□□ -0.47
UBE2F-213ENST00000439780 NOL8Q76FK4 1167 aaKnown RBP12.09□□□□□ -0.47
UBE2F-213ENST00000439780 EEPD1Q7L9B9 569 aa12.09□□□□□ -0.47
UBE2F-213ENST00000439780 DNERQ8NFT8 737 aa12.09□□□□□ -0.47
UBE2F-213ENST00000439780 DIS3LQ8TF46 1054 aaKnown RBP12.09□□□□□ -0.47
UBE2F-213ENST00000439780 ABHD16BQ9H3Z7 469 aa12.09□□□□□ -0.47
UBE2F-213ENST00000439780 ADD3Q9UEY8 706 aaKnown RBP12.09□□□□□ -0.47
UBE2F-213ENST00000439780 ZHX1Q9UKY1 873 aaPredicted RBP12.09□□□□□ -0.47
UBE2F-213ENST00000439780 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.08□□□□□ -0.48
UBE2F-213ENST00000439780 GCOM1H8Y6P7 765 aaPredicted RBP12.08□□□□□ -0.48
UBE2F-213ENST00000439780 MEIS2O14770 477 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 ADAMTS3O15072 1205 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
UBE2F-213ENST00000439780 POLR2MP0CAP2 368 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 IFNAR1P17181 557 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
UBE2F-213ENST00000439780 SCRN1Q12765 414 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 CCDC144BQ3MJ40 725 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 USP17L6PQ6QN14 398 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 HEATR3Q7Z4Q2 680 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 FBXO16Q8IX29 292 aaPredicted RBP12.08□□□□□ -0.48
UBE2F-213ENST00000439780 RMDN3Q96TC7 470 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 BACH2Q9BYV9 841 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 LRRC37A2A6NM11 1700 aa12.08□□□□□ -0.48
UBE2F-213ENST00000439780 LOC102724159A0A0B4J2E5 919 aa12.07□□□□□ -0.48
UBE2F-213ENST00000439780 STXBP3O00186 592 aa12.07□□□□□ -0.48
UBE2F-213ENST00000439780 PFKFB2O60825 505 aa12.07□□□□□ -0.48
UBE2F-213ENST00000439780 AKR1A1P14550 325 aa12.07□□□□□ -0.48
UBE2F-213ENST00000439780 EIF2AK2P19525 551 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms