RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 IQCDQ96DY2 449 aa17.02■□□□□ 0.32
CDC42EP4-202ENST00000439510 KCNG1Q9UIX4 513 aa17.02■□□□□ 0.32
CDC42EP4-202ENST00000439510 SNX12Q9UMY4 172 aa17.02■□□□□ 0.32
CDC42EP4-202ENST00000439510 HNRNPH3P31942 346 aaKnown RBP17.02■□□□□ 0.31
CDC42EP4-202ENST00000439510 KIF5AQ12840 1032 aa17.02■□□□□ 0.31
CDC42EP4-202ENST00000439510 CREG2Q8IUH2 290 aa17.02■□□□□ 0.31
CDC42EP4-202ENST00000439510 GSPT2Q8IYD1 628 aaKnown RBP17.02■□□□□ 0.31
CDC42EP4-202ENST00000439510 GPKOWQ92917 476 aaPredicted RBP eCLIP17.02■□□□□ 0.31
CDC42EP4-202ENST00000439510 NSUN4Q96CB9 384 aaKnown RBP17.02■□□□□ 0.31
CDC42EP4-202ENST00000439510 CNOT6LQ96LI5 555 aaKnown RBP17.02■□□□□ 0.31
CDC42EP4-202ENST00000439510 JRKLQ9Y4A0 524 aa17.02■□□□□ 0.31
CDC42EP4-202ENST00000439510 TAF1P21675 1872 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 ZNF263O14978 683 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 PRLRP16471 622 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 SBK1Q52WX2 424 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 CAVIN4Q5BKX8 364 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 AMOTL1Q8IY63 956 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 TRIM58Q8NG06 486 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 RASSF8Q8NHQ8 419 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 RASGRP4Q8TDF6 673 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 JADE2Q9NQC1 790 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 ATP8A2Q9NTI2 1148 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 FLT1P17948 1338 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 CCDC194A0A1B0GVG4 234 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 PPP1R2P41236 205 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 C2orf54Q08AI8 447 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 TYW1BQ6NUM6 668 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 PPM1EQ8WY54 764 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 GDAP1L1Q96MZ0 367 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 ARPP21Q9UBL0 812 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 PCDHA6Q9UN73 950 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 PCDHA8Q9Y5H6 950 aa17.01■□□□□ 0.31
CDC42EP4-202ENST00000439510 MACROD2A1Z1Q3 448 aa17■□□□□ 0.31
CDC42EP4-202ENST00000439510 GOLGA6BA6NDN3 693 aa17■□□□□ 0.31
CDC42EP4-202ENST00000439510 WTIPA6NIX2 430 aaPredicted RBP17■□□□□ 0.31
CDC42EP4-202ENST00000439510 CYP27A1Q02318 531 aa17■□□□□ 0.31
CDC42EP4-202ENST00000439510 DNAJC21Q5F1R6 531 aaKnown RBP17■□□□□ 0.31
CDC42EP4-202ENST00000439510 ANKRD40Q6AI12 368 aa17■□□□□ 0.31
CDC42EP4-202ENST00000439510 GALNT17Q6IS24 598 aa17■□□□□ 0.31
CDC42EP4-202ENST00000439510 CCDC70Q6NSX1 233 aa17■□□□□ 0.31
CDC42EP4-202ENST00000439510 BICDL1Q6ZP65 573 aa17■□□□□ 0.31
CDC42EP4-202ENST00000439510 FAM76AQ8TAV0 307 aa17■□□□□ 0.31
CDC42EP4-202ENST00000439510 FAM84BQ96KN1 310 aaPredicted RBP17■□□□□ 0.31
CDC42EP4-202ENST00000439510 CRNKL1Q9BZJ0 848 aaKnown RBP17■□□□□ 0.31
CDC42EP4-202ENST00000439510 SRP68Q9UHB9 627 aaKnown RBP17■□□□□ 0.31
CDC42EP4-202ENST00000439510 CCDC88AQ3V6T2 1871 aa17■□□□□ 0.31
CDC42EP4-202ENST00000439510 COBLL1Q53SF7 1204 aa17■□□□□ 0.31
CDC42EP4-202ENST00000439510 NIP7Q9Y221 180 aaKnown RBP eCLIP17■□□□□ 0.31
CDC42EP4-202ENST00000439510 TSPY2A6NKD2 308 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 AK8Q96MA6 479 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 TRIM9Q9C026 710 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 SH2D4AQ9H788 454 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 BCCIPQ9P287 314 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 PLAGL2Q9UPG8 496 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 MYH10P35580 1976 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 GOLGA6CA6NDK9 693 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 LCA5LO95447 670 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 GOLGA6DP0CG33 693 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 MECOMQ03112 1051 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 SPA17Q15506 151 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 TTC31Q49AM3 519 aaPredicted RBP16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 PACS2Q86VP3 889 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 EFCAB13Q8IY85 973 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 C7orf25Q9BPX7 421 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 NOC4LQ9BVI4 516 aaKnown RBP16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 KAT14Q9H8E8 782 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 GOLGA6AQ9NYA3 693 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 LRWD1Q9UFC0 647 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 APBA3O96018 575 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 CPP00450 1065 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 CYP2D6P10635 497 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 MTIF2P46199 727 aaKnown RBP16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 DGKHQ86XP1 1220 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 ANKRD18AQ8IVF6 992 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 ANKS1AQ92625 1134 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 CCDC47Q96A33 483 aaKnown RBP16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 CCDC42Q96M95 316 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 PLIN2Q99541 437 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 SH3GL2Q99962 352 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 PLEKHA4Q9H4M7 779 aa16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 BSDC1Q9NW68 430 aaPredicted RBP16.99■□□□□ 0.31
CDC42EP4-202ENST00000439510 USO1O60763 962 aaKnown RBP16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 TACC1O75410 805 aa16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 PLCG1P19174 1290 aa16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 NT5C2P49902 561 aa16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 GRM4Q14833 912 aa16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 INF2Q27J81 1249 aa16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 PDE4DQ08499 809 aa16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 STK4Q13043 487 aa16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 FBXO33Q7Z6M2 555 aa16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 STAG2Q8N3U4 1231 aa16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 CAPN6Q9Y6Q1 641 aa16.98■□□□□ 0.31
CDC42EP4-202ENST00000439510 CHRM1P11229 460 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 PPFIA1Q13136 1202 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 CCDC96Q2M329 555 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 FKBP15Q5T1M5 1219 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 CABP7Q86V35 215 aa16.97■□□□□ 0.31
CDC42EP4-202ENST00000439510 PROM2Q8N271 834 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms