RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ZEB2O60315 1214 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 PGK1P00558 417 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 CFBP00751 764 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 ADCYAP1R1P41586 468 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 SLC30A10Q6XR72 485 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 SLC39A5Q6ZMH5 540 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 C7orf61Q8IZ16 206 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 MORC4Q8TE76 937 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 NSUN6Q8TEA1 469 aaKnown RBP12.13□□□□□ -0.47
MCF2L-216ENST00000439475 RRP36Q96EU6 259 aaKnown RBP12.13□□□□□ -0.47
MCF2L-216ENST00000439475 PIGSQ96S52 555 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
MCF2L-216ENST00000439475 PRKAG2Q9UGJ0 569 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 Q9Y3F1 56 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 FRMPD3Q5JV73 1810 aa12.13□□□□□ -0.47
MCF2L-216ENST00000439475 ADAMTS4O75173 837 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 C6orf222P0C671 652 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-216ENST00000439475 ATN1P54259 1190 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-216ENST00000439475 GJA9P57773 515 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 EXOSC10Q01780 885 aaKnown RBP12.12□□□□□ -0.47
MCF2L-216ENST00000439475 PPP2R5BQ15173 497 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 ARHGEF16Q5VV41 709 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 BLOC1S2Q6QNY1 142 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 SGMS1Q86VZ5 419 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 FANCBQ8NB91 859 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 KLHDC9Q8NEP7 349 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 GLT1D1Q96MS3 346 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 PURBQ96QR8 312 aaKnown RBP12.12□□□□□ -0.47
MCF2L-216ENST00000439475 IWS1Q96ST2 819 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 SPZ1Q9BXG8 430 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 LRRC2Q9BYS8 371 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 KATNBL1Q9H079 304 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 PHF24Q9UPV7 400 aa12.12□□□□□ -0.47
MCF2L-216ENST00000439475 GCOM1H8Y6P7 765 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-216ENST00000439475 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
MCF2L-216ENST00000439475 DYNC1LI2O43237 492 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-216ENST00000439475 ZBTB43O43298 467 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 CYTH3O43739 400 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 POLR2MP0CAP2 368 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 CST5P28325 142 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-216ENST00000439475 STXBP2Q15833 593 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 LRRC26Q2I0M4 334 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 ADCK5Q3MIX3 580 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 BRDTQ58F21 947 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-216ENST00000439475 GNASQ5JWF2 1037 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 TAPT1Q6NXT6 567 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-216ENST00000439475 SYTL5Q8TDW5 730 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-216ENST00000439475 TBC1D5Q92609 795 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 KCNB2Q92953 911 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 VTI1AQ96AJ9 217 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
MCF2L-216ENST00000439475 TAAR1Q96RJ0 339 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 RMDN3Q96TC7 470 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 MYL10Q9BUA6 226 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-216ENST00000439475 STARD7Q9NQZ5 370 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 SYNRGQ9UMZ2 1314 aa12.11□□□□□ -0.47
MCF2L-216ENST00000439475 BAZ2BQ9UIF8 2168 aaKnown RBP12.11□□□□□ -0.47
MCF2L-216ENST00000439475 CCDC196A0A1B0GTZ2 297 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 ACLYP53396 1101 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 RTP1P59025 263 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 TTLL4Q14679 1199 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 KCNA10Q16322 511 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 C1orf53Q5VUE5 145 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 MICU3Q86XE3 530 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 SCFD2Q8WU76 684 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 PIBF1Q8WXW3 757 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 CUL5Q93034 780 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 WDR11Q9BZH6 1224 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 UPF3AQ9H1J1 476 aaKnown RBP12.1□□□□□ -0.47
MCF2L-216ENST00000439475 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 NAP1L2Q9ULW6 460 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-216ENST00000439475 GNEQ9Y223 722 aaKnown RBP12.1□□□□□ -0.47
MCF2L-216ENST00000439475 ATP11BQ9Y2G3 1177 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 SNX14Q9Y5W7 946 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 ASTN1O14525 1302 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 ELP1O95163 1332 aa12.1□□□□□ -0.47
MCF2L-216ENST00000439475 KLF18A0A0U1RQI7 1052 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-216ENST00000439475 RBM47A0AV96 593 aaKnown RBP12.09□□□□□ -0.47
MCF2L-216ENST00000439475 EIF3JO75822 258 aaKnown RBP12.09□□□□□ -0.47
MCF2L-216ENST00000439475 CABYRO75952 493 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 ASGR1P07306 291 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 SMPD1P17405 629 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 RXRAP19793 462 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 EDNRBP24530 442 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 HSD17B4P51659 736 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 RCAN1P53805 252 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 NKX3-2P78367 333 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 GHRHRQ02643 423 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 RTN1Q16799 776 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 DUSP28Q4G0W2 176 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 APOA5Q6Q788 366 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 Q6ZUG5 572 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 TLK2Q86UE8 772 aa12.09□□□□□ -0.47
MCF2L-216ENST00000439475 SRBD1Q8N5C6 995 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms