RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 VAMP4O75379 141 aa6.91□□□□□ -1.3
UPP2-IT1-201ENST00000439185 ADRB1P08588 477 aa6.91□□□□□ -1.3
UPP2-IT1-201ENST00000439185 GLI4P10075 376 aa6.91□□□□□ -1.3
UPP2-IT1-201ENST00000439185 EEF1DP3Q658K8 133 aa6.91□□□□□ -1.3
UPP2-IT1-201ENST00000439185 GGNQ86UU5 652 aa6.91□□□□□ -1.3
UPP2-IT1-201ENST00000439185 HAUS7Q99871 368 aa6.91□□□□□ -1.3
UPP2-IT1-201ENST00000439185 SPATA25Q9BR10 227 aa6.91□□□□□ -1.3
UPP2-IT1-201ENST00000439185 GINM1Q9NU53 330 aa6.91□□□□□ -1.3
UPP2-IT1-201ENST00000439185 STXBP3O00186 592 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 AURKAO14965 403 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 HTRA3P83110 453 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 DPY19L1Q2PZI1 675 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 NT5DC1Q5TFE4 455 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 HEATR6Q6AI08 1181 aaKnown RBP6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 ADAT2Q7Z6V5 191 aaKnown RBP6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 SAPCD2Q86UD0 394 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 CABP7Q86V35 215 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 LZTR1Q8N653 840 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 KLHL25Q9H0H3 589 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 USP40Q9NVE5 1235 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 PCDHB10Q9UN67 800 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 RWDD3Q9Y3V2 267 aa6.9□□□□□ -1.3
UPP2-IT1-201ENST00000439185 PPP1R11O60927 126 aaPredicted RBP6.89□□□□□ -1.31
UPP2-IT1-201ENST00000439185 PMLP29590 882 aa6.89□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SEPHS1P49903 392 aa6.89□□□□□ -1.31
UPP2-IT1-201ENST00000439185 UBXN11Q5T124 520 aa6.89□□□□□ -1.31
UPP2-IT1-201ENST00000439185 ZFYVE27Q5T4F4 411 aa6.89□□□□□ -1.31
UPP2-IT1-201ENST00000439185 B3GNT8Q7Z7M8 397 aa6.89□□□□□ -1.31
UPP2-IT1-201ENST00000439185 FGD4Q96M96 766 aa6.89□□□□□ -1.31
UPP2-IT1-201ENST00000439185 GBP3Q9H0R5 595 aa6.89□□□□□ -1.31
UPP2-IT1-201ENST00000439185 FBLN5Q9UBX5 448 aa6.89□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SLC12A7Q9Y666 1083 aa6.89□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SH3D21A4FU49 640 aa6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 C2orf71A6NGG8 1288 aa6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 PPM1BO75688 479 aa6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 EPHX1P07099 455 aa6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 EIF6P56537 245 aaKnown RBP6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SLC7A5Q01650 507 aa6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 EFEMP1Q12805 493 aa6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 PAK2Q13177 524 aa6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 COL9A2Q14055 689 aaPredicted RBP6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 FERMT3Q86UX7 667 aa6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 CPNE8Q86YQ8 564 aa6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 PHAXQ9H814 394 aaKnown RBP6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 EFR3BQ9Y2G0 817 aa6.88□□□□□ -1.31
UPP2-IT1-201ENST00000439185 A0A1W2PQH9 124 aa6.87□□□□□ -1.31
UPP2-IT1-201ENST00000439185 DLX2Q07687 328 aaPredicted RBP6.87□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SPATS1Q496A3 300 aa6.87□□□□□ -1.31
UPP2-IT1-201ENST00000439185 ZNF654Q8IZM8 581 aa6.87□□□□□ -1.31
UPP2-IT1-201ENST00000439185 TSPAN17Q96FV3 270 aa6.87□□□□□ -1.31
UPP2-IT1-201ENST00000439185 PEX11GQ96HA9 241 aa6.87□□□□□ -1.31
UPP2-IT1-201ENST00000439185 MTA3Q9BTC8 594 aa6.87□□□□□ -1.31
UPP2-IT1-201ENST00000439185 GULP1Q9UBP9 304 aa6.87□□□□□ -1.31
UPP2-IT1-201ENST00000439185 CGGBP1Q9UFW8 167 aaPredicted RBP6.87□□□□□ -1.31
UPP2-IT1-201ENST00000439185 BACE2Q9Y5Z0 518 aa6.87□□□□□ -1.31
UPP2-IT1-201ENST00000439185 GIPRP48546 466 aa6.86□□□□□ -1.31
UPP2-IT1-201ENST00000439185 AMPD2Q01433 879 aa6.86□□□□□ -1.31
UPP2-IT1-201ENST00000439185 CARFQ8N187 725 aa6.86□□□□□ -1.31
UPP2-IT1-201ENST00000439185 ARHGEF39Q8N4T4 335 aa6.86□□□□□ -1.31
UPP2-IT1-201ENST00000439185 NETO2Q8NC67 525 aa6.86□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SMARCC2Q8TAQ2 1214 aa6.86□□□□□ -1.31
UPP2-IT1-201ENST00000439185 USP33Q8TEY7 942 aa6.86□□□□□ -1.31
UPP2-IT1-201ENST00000439185 DDX1Q92499 740 aaKnown RBP6.86□□□□□ -1.31
UPP2-IT1-201ENST00000439185 NOX5Q96PH1 765 aa6.86□□□□□ -1.31
UPP2-IT1-201ENST00000439185 NUDT5Q9UKK9 219 aa6.86□□□□□ -1.31
UPP2-IT1-201ENST00000439185 NPHP3-ACAD11A0A0J9YXS1 232 aa6.85□□□□□ -1.31
UPP2-IT1-201ENST00000439185 PAMP19021 973 aa6.85□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SOX9P48436 509 aa6.85□□□□□ -1.31
UPP2-IT1-201ENST00000439185 TRIM26Q12899 539 aaPredicted RBP6.85□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SLC9A5Q14940 896 aa6.85□□□□□ -1.31
UPP2-IT1-201ENST00000439185 C19orf47Q8N9M1 422 aaKnown RBP6.85□□□□□ -1.31
UPP2-IT1-201ENST00000439185 CPA5Q8WXQ8 436 aa6.85□□□□□ -1.31
UPP2-IT1-201ENST00000439185 BORCS6Q96GS4 357 aa6.85□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SPATA32Q96LK8 384 aa6.85□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SUGT1Q9Y2Z0 365 aa6.85□□□□□ -1.31
UPP2-IT1-201ENST00000439185 NOBOXO60393 691 aa6.84□□□□□ -1.31
UPP2-IT1-201ENST00000439185 CACNB2Q08289 660 aaPredicted RBP6.84□□□□□ -1.31
UPP2-IT1-201ENST00000439185 PPP2R5EQ16537 467 aa6.84□□□□□ -1.31
UPP2-IT1-201ENST00000439185 TMCO4Q5TGY1 634 aa6.84□□□□□ -1.31
UPP2-IT1-201ENST00000439185 OR6P1Q8NGX9 317 aa6.84□□□□□ -1.31
UPP2-IT1-201ENST00000439185 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.31
UPP2-IT1-201ENST00000439185 RCC1LQ96I51 464 aaKnown RBP6.84□□□□□ -1.31
UPP2-IT1-201ENST00000439185 SPATA6Q9NWH7 488 aaPredicted RBP6.84□□□□□ -1.31
UPP2-IT1-201ENST00000439185 DUSP10Q9Y6W6 482 aa6.84□□□□□ -1.31
UPP2-IT1-201ENST00000439185 K7ESM1 405 aa6.83□□□□□ -1.32
UPP2-IT1-201ENST00000439185 SCAMP3O14828 347 aaKnown RBP6.83□□□□□ -1.32
UPP2-IT1-201ENST00000439185 ZBTB7AO95365 584 aa6.83□□□□□ -1.32
UPP2-IT1-201ENST00000439185 CNR2P34972 360 aa6.83□□□□□ -1.32
UPP2-IT1-201ENST00000439185 SARSP49591 514 aaKnown RBP6.83□□□□□ -1.32
UPP2-IT1-201ENST00000439185 GRB10Q13322 594 aa6.83□□□□□ -1.32
UPP2-IT1-201ENST00000439185 ZXDCQ2QGD7 858 aaPredicted RBP6.83□□□□□ -1.32
UPP2-IT1-201ENST00000439185 WWC2Q6AWC2 1192 aa6.83□□□□□ -1.32
UPP2-IT1-201ENST00000439185 TRBV23OR9-2A0A075B6M9 112 aa6.82□□□□□ -1.32
UPP2-IT1-201ENST00000439185 C7orf72A4D263 438 aa6.82□□□□□ -1.32
UPP2-IT1-201ENST00000439185 NPHS1O60500 1241 aa6.82□□□□□ -1.32
UPP2-IT1-201ENST00000439185 FUCA1P04066 466 aa6.82□□□□□ -1.32
UPP2-IT1-201ENST00000439185 NTRK1P04629 796 aa6.82□□□□□ -1.32
UPP2-IT1-201ENST00000439185 GJA9P57773 515 aa6.82□□□□□ -1.32
UPP2-IT1-201ENST00000439185 KIAA1211LQ6NV74 962 aa6.82□□□□□ -1.32
UPP2-IT1-201ENST00000439185 HHIPL2Q6UWX4 724 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms