RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 HPS3Q969F9 1004 aa13.58□□□□□ -0.24
HDAC8-214ENST00000439122 CDK5RAP3Q96JB5 506 aa13.58□□□□□ -0.24
HDAC8-214ENST00000439122 MTMR9Q96QG7 549 aa13.58□□□□□ -0.24
HDAC8-214ENST00000439122 CHP1Q99653 195 aa13.58□□□□□ -0.24
HDAC8-214ENST00000439122 DUSP9Q99956 384 aaKnown RBP13.58□□□□□ -0.24
HDAC8-214ENST00000439122 QTRT2Q9H974 415 aaKnown RBP13.58□□□□□ -0.24
HDAC8-214ENST00000439122 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
HDAC8-214ENST00000439122 LTBP1Q14766 1721 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 ABL1P00519 1130 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 DNM2P50570 870 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 ZNF543Q08ER8 600 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 BMS1Q14692 1282 aaKnown RBP13.57□□□□□ -0.24
HDAC8-214ENST00000439122 CCDC96Q2M329 555 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 TSR1Q2NL82 804 aaKnown RBP13.57□□□□□ -0.24
HDAC8-214ENST00000439122 KIF4BQ2VIQ3 1234 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 TTBK2Q6IQ55 1244 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 CNNM4Q6P4Q7 775 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 SV2BQ7L1I2 683 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 OR8K1Q8NGG5 319 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 ZSWIM4Q9H7M6 989 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 JMJD4Q9H9V9 463 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 LRRC37AA6NMS7 1700 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 PNMA6FA0A0J9YX94 578 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 CTAGE9A4FU28 777 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 POTEMA6NI47 508 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 SRGNP10124 158 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 SHMT1P34896 483 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 SLC16A2P36021 539 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 DMTNQ08495 405 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 UBE2SQ16763 222 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 CDC42EP5Q6NZY7 148 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 SLC35F6Q8N357 371 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 GPR161Q8N6U8 529 aaKnown RBP13.57□□□□□ -0.24
HDAC8-214ENST00000439122 CNOT6LQ96LI5 555 aaKnown RBP13.57□□□□□ -0.24
HDAC8-214ENST00000439122 RAB34Q9BZG1 259 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 SLC39A2Q9NP94 309 aa13.57□□□□□ -0.24
HDAC8-214ENST00000439122 RAD21O60216 631 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 HLA-DOAP06340 250 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 TRIM21P19474 475 aaKnown RBP13.56□□□□□ -0.24
HDAC8-214ENST00000439122 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDAC8-214ENST00000439122 GRB10Q13322 594 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 MCM6Q14566 821 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 KCTD1Q719H9 257 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 RSRC2Q7L4I2 434 aaKnown RBP13.56□□□□□ -0.24
HDAC8-214ENST00000439122 PROM2Q8N271 834 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 KIAA0895Q8NCT3 520 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 GOLGA1Q92805 767 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 TEKT1Q969V4 418 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 TMX4Q9H1E5 349 aaPredicted RBP13.56□□□□□ -0.24
HDAC8-214ENST00000439122 EPN1Q9Y6I3 576 aaPredicted RBP13.56□□□□□ -0.24
HDAC8-214ENST00000439122 PPP1R11O60927 126 aaPredicted RBP13.56□□□□□ -0.24
HDAC8-214ENST00000439122 NDUFA10O95299 355 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 SLURP2P0DP57 97 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 NPR1P16066 1061 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 PPP1R2P41236 205 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 MTIF2P46199 727 aaKnown RBP13.56□□□□□ -0.24
HDAC8-214ENST00000439122 TBC1D8BQ0IIM8 1120 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 DYMQ7RTS9 669 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 KRT27Q7Z3Y8 459 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 FAM114A1Q8IWE2 563 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 LARP4BQ92615 738 aaKnown RBP13.56□□□□□ -0.24
HDAC8-214ENST00000439122 PCMTD1Q96MG8 357 aaPredicted RBP13.56□□□□□ -0.24
HDAC8-214ENST00000439122 GTPBP4Q9BZE4 634 aaKnown RBP13.56□□□□□ -0.24
HDAC8-214ENST00000439122 RIC8AQ9NPQ8 531 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 BLOC1S4Q9NUP1 217 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 FAM53CQ9NYF3 392 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 CAPN11Q9UMQ6 739 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 FHOD1Q9Y613 1164 aa13.56□□□□□ -0.24
HDAC8-214ENST00000439122 MYMKA6NI61 221 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 EDIL3O43854 480 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 HSPA1LP34931 641 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 ARHGAP25P42331 645 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 CHMP4BP1P59074 171 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 NFIAQ12857 509 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
HDAC8-214ENST00000439122 SNX29Q8TEQ0 813 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 RABGGTAQ92696 567 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 CUL5Q93034 780 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 PNMA5Q96PV4 448 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 DNAJC7Q99615 494 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 NOC4LQ9BVI4 516 aaKnown RBP13.55□□□□□ -0.24
HDAC8-214ENST00000439122 STK17AQ9UEE5 414 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 PUF60Q9UHX1 559 aaKnown RBP13.55□□□□□ -0.24
HDAC8-214ENST00000439122 CDC23Q9UJX2 597 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 PNMA6AP0CW24 399 aaPredicted RBP13.55□□□□□ -0.24
HDAC8-214ENST00000439122 ALDH1B1P30837 517 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 KLK7P49862 253 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 GPATCH4Q5T3I0 446 aaKnown RBP13.55□□□□□ -0.24
HDAC8-214ENST00000439122 KRT79Q5XKE5 535 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 PPP1R18Q6NYC8 613 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 SRGAP1Q7Z6B7 1085 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 AGPAT5Q9NUQ2 364 aa13.55□□□□□ -0.24
HDAC8-214ENST00000439122 MYO3BQ8WXR4 1341 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 ZBTB5O15062 677 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 MARCH6O60337 910 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 SEC31AO94979 1220 aaKnown RBP13.54□□□□□ -0.24
HDAC8-214ENST00000439122 ZRANB2O95218 330 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDAC8-214ENST00000439122 IDEP14735 1019 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 MRPL12P52815 198 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms