RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 HLA-DOAP06340 250 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 ATF7P17544 494 aaPredicted RBP13.74□□□□□ -0.21
RTN4-211ENST00000438462 GSTO1P78417 241 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 ZNF200P98182 395 aaPredicted RBP13.74□□□□□ -0.21
RTN4-211ENST00000438462 ATP2B3Q16720 1220 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 ABCB5Q2M3G0 1257 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.74□□□□□ -0.215e-9■■■□□ 16.5
RTN4-211ENST00000438462 MYOCDQ8IZQ8 938 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 MAGEB6Q8N7X4 407 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 NSUN4Q96CB9 384 aaKnown RBP13.74□□□□□ -0.21
RTN4-211ENST00000438462 DDX11Q96FC9 970 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 FGD4Q96M96 766 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 LMAN2LQ9H0V9 348 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 NCDNQ9UBB6 729 aa13.74□□□□□ -0.21
RTN4-211ENST00000438462 PDS5AQ29RF7 1337 aaKnown RBP13.73□□□□□ -0.21
RTN4-211ENST00000438462 SCN10AQ9Y5Y9 1956 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 MYH1P12882 1939 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 NBNO60934 754 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 CXCL10P02778 98 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 LDHCP07864 332 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 CTNNB1P35222 781 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 COPB2P35606 906 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 STAT3P40763 770 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 SUMF1Q8NBK3 374 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 AFAP1L1Q8TED9 768 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 RIN2Q8WYP3 895 aaPredicted RBP13.73□□□□□ -0.21
RTN4-211ENST00000438462 LHX6Q9UPM6 363 aa13.73□□□□□ -0.21
RTN4-211ENST00000438462 GLP2RO95838 553 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 SMPD1P17405 629 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 KCNA4P22459 653 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 GUCY1A2P33402 732 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 MCAMP43121 646 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 IKBKEQ14164 716 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
RTN4-211ENST00000438462 CCDC102BQ68D86 513 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 LRRC8DQ7L1W4 858 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 CCDC144CPQ8IYA2 1237 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 SUSD6Q92537 303 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 YME1L1Q96TA2 773 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 ZNF214Q9UL59 606 aaPredicted RBP13.72□□□□□ -0.21
RTN4-211ENST00000438462 ADAMTS8Q9UP79 889 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 NOD1Q9Y239 953 aa13.72□□□□□ -0.21
RTN4-211ENST00000438462 CACNA1FO60840 1977 aa13.71□□□□□ -0.21
RTN4-211ENST00000438462 SMG1Q96Q15 3661 aaKnown RBP13.71□□□□□ -0.21
RTN4-211ENST00000438462 PMLP29590 882 aa13.71□□□□□ -0.21
RTN4-211ENST00000438462 RING1Q06587 406 aa13.71□□□□□ -0.21
RTN4-211ENST00000438462 CERKLQ49MI3 558 aaPredicted RBP13.71□□□□□ -0.21
RTN4-211ENST00000438462 ADGRD2Q7Z7M1 963 aa13.71□□□□□ -0.21
RTN4-211ENST00000438462 SPICE1Q8N0Z3 855 aa13.71□□□□□ -0.21
RTN4-211ENST00000438462 GPR161Q8N6U8 529 aaKnown RBP13.71□□□□□ -0.21
RTN4-211ENST00000438462 EFHBQ8N7U6 833 aa13.71□□□□□ -0.21
RTN4-211ENST00000438462 ANKRD44Q8N8A2 993 aa13.71□□□□□ -0.21
RTN4-211ENST00000438462 CABP5Q9NP86 173 aa13.71□□□□□ -0.21
RTN4-211ENST00000438462 AATFQ9NY61 560 aaKnown RBP eCLIP13.71□□□□□ -0.21
RTN4-211ENST00000438462 NBEAQ8NFP9 2946 aa13.7□□□□□ -0.22
RTN4-211ENST00000438462 AMHP03971 560 aa13.7□□□□□ -0.22
RTN4-211ENST00000438462 SELPP16109 830 aa13.7□□□□□ -0.22
RTN4-211ENST00000438462 ADORA1P30542 326 aa13.7□□□□□ -0.22
RTN4-211ENST00000438462 PURAQ00577 322 aaKnown RBP13.7□□□□□ -0.22
RTN4-211ENST00000438462 SEPT2Q15019 361 aa13.7□□□□□ -0.22
RTN4-211ENST00000438462 TMEM63BQ5T3F8 832 aa13.7□□□□□ -0.22
RTN4-211ENST00000438462 CCDC155Q8N6L0 562 aa13.7□□□□□ -0.22
RTN4-211ENST00000438462 CAGE1Q8TC20 777 aa13.7□□□□□ -0.22
RTN4-211ENST00000438462 RUNDC1Q96C34 613 aa13.7□□□□□ -0.22
RTN4-211ENST00000438462 NOL10Q9BSC4 688 aaKnown RBP13.7□□□□□ -0.22
RTN4-211ENST00000438462 C11orf84Q9BUA3 381 aaPredicted RBP13.7□□□□□ -0.22
RTN4-211ENST00000438462 ADAMTS5Q9UNA0 930 aa13.7□□□□□ -0.22
RTN4-211ENST00000438462 EYA2O00167 538 aa13.69□□□□□ -0.22
RTN4-211ENST00000438462 TAF4O00268 1085 aa13.69□□□□□ -0.22
RTN4-211ENST00000438462 ZBTB22O15209 634 aa13.69□□□□□ -0.22
RTN4-211ENST00000438462 MMP1P03956 469 aa13.69□□□□□ -0.22
RTN4-211ENST00000438462 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
RTN4-211ENST00000438462 NPR3P17342 541 aa13.69□□□□□ -0.22
RTN4-211ENST00000438462 SHC2P98077 582 aa13.69□□□□□ -0.22
RTN4-211ENST00000438462 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
RTN4-211ENST00000438462 PPP2R3CQ969Q6 453 aa13.69□□□□□ -0.22
RTN4-211ENST00000438462 RTP3Q9BQQ7 232 aa13.69□□□□□ -0.22
RTN4-211ENST00000438462 POLR3EQ9NVU0 708 aa13.69□□□□□ -0.22
RTN4-211ENST00000438462 BPTFQ12830 3046 aa13.69□□□□□ -0.22
RTN4-211ENST00000438462 MYO10Q9HD67 2058 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 C1QTNF9BB2RNN3 333 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 E9PSI1 815 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 C5orf67F2Z3F1 127 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 VWA5AO00534 786 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 MYL3P08590 195 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 C1QTNF9P0C862 333 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 FAM133AQ8N9E0 248 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 REPS2Q8NFH8 660 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 RAI14Q9P0K7 980 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 USP18Q9UMW8 372 aa13.68□□□□□ -0.22
RTN4-211ENST00000438462 NAV1Q8NEY1 1877 aa13.67□□□□□ -0.22
RTN4-211ENST00000438462 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
RTN4-211ENST00000438462 NFRKBQ6P4R8 1299 aa13.67□□□□□ -0.22
RTN4-211ENST00000438462 PRR23BQ6ZRT6 265 aa13.67□□□□□ -0.22
RTN4-211ENST00000438462 ATG9AQ7Z3C6 839 aa13.67□□□□□ -0.22
RTN4-211ENST00000438462 MTG1Q9BT17 334 aaPredicted RBP13.67□□□□□ -0.22
RTN4-211ENST00000438462 LOC400499M0QZD8 3231 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms