RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 EYA2O00167 538 aa11.24□□□□□ -0.61
RPE-209ENST00000438191 GRM6O15303 877 aa11.24□□□□□ -0.61
RPE-209ENST00000438191 AOC1P19801 751 aa11.24□□□□□ -0.61
RPE-209ENST00000438191 COPB2P35606 906 aa11.24□□□□□ -0.61
RPE-209ENST00000438191 MTMR3Q13615 1198 aa11.24□□□□□ -0.61
RPE-209ENST00000438191 CCDC102BQ68D86 513 aa11.24□□□□□ -0.61
RPE-209ENST00000438191 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.24□□□□□ -0.61
RPE-209ENST00000438191 ANKRD44Q8N8A2 993 aa11.24□□□□□ -0.61
RPE-209ENST00000438191 RUNDC1Q96C34 613 aa11.24□□□□□ -0.61
RPE-209ENST00000438191 ZNF214Q9UL59 606 aaPredicted RBP11.24□□□□□ -0.61
RPE-209ENST00000438191 SCN10AQ9Y5Y9 1956 aa11.24□□□□□ -0.61
RPE-209ENST00000438191 ZZEF1O43149 2961 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 RBAK-RBAKDNI3L0D1 243 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 NBNO60934 754 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 HLA-DOAP06340 250 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 MCAMP43121 646 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 IKBKEQ14164 716 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 CERKLQ49MI3 558 aaPredicted RBP11.23□□□□□ -0.61
RPE-209ENST00000438191 FAM47CQ5HY64 1035 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 ATF7IPQ6VMQ6 1270 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 GPR161Q8N6U8 529 aaKnown RBP11.23□□□□□ -0.61
RPE-209ENST00000438191 FLCNQ8NFG4 579 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 AFAP1L1Q8TED9 768 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 SUSD6Q92537 303 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 SMOC2Q9H3U7 446 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 CABP5Q9NP86 173 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 SAP30BPQ9UHR5 308 aaKnown RBP11.23□□□□□ -0.61
RPE-209ENST00000438191 ZMIZ1Q9ULJ6 1067 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 MYH1P12882 1939 aa11.23□□□□□ -0.61
RPE-209ENST00000438191 NBPF7P0C2Y1 421 aaPredicted RBP11.22□□□□□ -0.61
RPE-209ENST00000438191 SMPD1P17405 629 aa11.22□□□□□ -0.61
RPE-209ENST00000438191 SEPT2Q15019 361 aa11.22□□□□□ -0.61
RPE-209ENST00000438191 ATG9AQ7Z3C6 839 aa11.22□□□□□ -0.61
RPE-209ENST00000438191 CCDC144CPQ8IYA2 1237 aa11.22□□□□□ -0.61
RPE-209ENST00000438191 EFHBQ8N7U6 833 aa11.22□□□□□ -0.61
RPE-209ENST00000438191 REPS2Q8NFH8 660 aa11.22□□□□□ -0.61
RPE-209ENST00000438191 PPP1R13LQ8WUF5 828 aa11.22□□□□□ -0.61
RPE-209ENST00000438191 ADAMTS8Q9UP79 889 aa11.22□□□□□ -0.61
RPE-209ENST00000438191 FRYQ5TBA9 3013 aa11.22□□□□□ -0.61
RPE-209ENST00000438191 C5orf67F2Z3F1 127 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 GLP2RO95838 553 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 RB1P06400 928 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 SELPP16109 830 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 NPR3P17342 541 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 PMLP29590 882 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 ADORA1P30542 326 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 ZNF200P98182 395 aaPredicted RBP11.21□□□□□ -0.61
RPE-209ENST00000438191 PURAQ00577 322 aaKnown RBP11.21□□□□□ -0.61
RPE-209ENST00000438191 LMNB2Q03252 620 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 TWISTNBQ3B726 338 aaPredicted RBP11.21□□□□□ -0.61
RPE-209ENST00000438191 TMEM63BQ5T3F8 832 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 LRRC8DQ7L1W4 858 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 CAGE1Q8TC20 777 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 POLR3EQ9NVU0 708 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 BARX2Q9UMQ3 279 aaPredicted RBP11.21□□□□□ -0.61
RPE-209ENST00000438191 Q9Y3F1 56 aa11.21□□□□□ -0.61
RPE-209ENST00000438191 VWA5AO00534 786 aa11.2□□□□□ -0.62
RPE-209ENST00000438191 ALDH1L1O75891 902 aa11.2□□□□□ -0.62
RPE-209ENST00000438191 PARNO95453 639 aaKnown RBP11.2□□□□□ -0.62
RPE-209ENST00000438191 SHC2P98077 582 aa11.2□□□□□ -0.62
RPE-209ENST00000438191 CALD1Q05682 793 aaKnown RBP11.2□□□□□ -0.62
RPE-209ENST00000438191 ZC3H14Q6PJT7 736 aaKnown RBP11.2□□□□□ -0.62
RPE-209ENST00000438191 ADGRD2Q7Z7M1 963 aa11.2□□□□□ -0.62
RPE-209ENST00000438191 MYOCDQ8IZQ8 938 aa11.2□□□□□ -0.62
RPE-209ENST00000438191 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
RPE-209ENST00000438191 RTP3Q9BQQ7 232 aa11.2□□□□□ -0.62
RPE-209ENST00000438191 FBXO28Q9NVF7 368 aa11.2□□□□□ -0.62
RPE-209ENST00000438191 AATFQ9NY61 560 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPE-209ENST00000438191 TAF4O00268 1085 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 AMHP03971 560 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 PLCG2P16885 1265 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 CTNNB1P35222 781 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
RPE-209ENST00000438191 PPP4CP60510 307 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 PTPN11Q06124 597 aaPredicted RBP11.19□□□□□ -0.62
RPE-209ENST00000438191 CAMK1Q14012 370 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
RPE-209ENST00000438191 NFRKBQ6P4R8 1299 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 SPICE1Q8N0Z3 855 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 CTAGE1Q96RT6 745 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 YME1L1Q96TA2 773 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 NOL10Q9BSC4 688 aaKnown RBP11.19□□□□□ -0.62
RPE-209ENST00000438191 C11orf84Q9BUA3 381 aaPredicted RBP11.19□□□□□ -0.62
RPE-209ENST00000438191 EHD4Q9H223 541 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 NCDNQ9UBB6 729 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 SERPINB13Q9UIV8 391 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 LHX6Q9UPM6 363 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 NOD1Q9Y239 953 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 RIPK3Q9Y572 518 aa11.19□□□□□ -0.62
RPE-209ENST00000438191 WDR46O15213 610 aaKnown RBP11.18□□□□□ -0.62
RPE-209ENST00000438191 LGR5O75473 907 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 CSPG5O95196 566 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 BAG3O95817 575 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 MMP1P03956 469 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 LINC00271P0C7V0 271 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 SHMT1P34896 483 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 RING1Q06587 406 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 RBL2Q08999 1139 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 TBC1D9Q6ZT07 1266 aa11.18□□□□□ -0.62
RPE-209ENST00000438191 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms