RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 MUM1L1Q5H9M0 696 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 USP17L2Q6R6M4 530 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 USP28Q96RU2 1077 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 ZNF148Q9UQR1 794 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 INPP5FQ9Y2H2 1132 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 A0A087WWV3 80 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 GNA14O95837 355 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 NLGN1Q8N2Q7 840 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 CCNYQ8ND76 341 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 PRDM5Q9NQX1 630 aaPredicted RBP11.31□□□□□ -0.6
SHPRH-206ENST00000438092 FEZ2Q9UHY8 353 aaPredicted RBP11.31□□□□□ -0.6
SHPRH-206ENST00000438092 USP17L8P0C7I0 530 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 ATP1A2P50993 1020 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 RNF217Q8TC41 542 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 DACT3Q96B18 629 aaPredicted RBP11.31□□□□□ -0.6
SHPRH-206ENST00000438092 ANKRD36BP1Q96IX9 119 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 SLITRK6Q9H5Y7 841 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 XDHP47989 1333 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 POC1B-GALNT4F8VUJ3 575 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 FMNL1O95466 1100 aaPredicted RBP11.31□□□□□ -0.6
SHPRH-206ENST00000438092 CD58P19256 250 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 STX2P32856 288 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 MYSM1Q5VVJ2 828 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 PI16Q6UXB8 463 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 NLRP4Q96MN2 994 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 KMT5AQ9NQR1 393 aa11.31□□□□□ -0.6
SHPRH-206ENST00000438092 RGS16O15492 202 aaPredicted RBP11.3□□□□□ -0.6
SHPRH-206ENST00000438092 GBP1P32455 592 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 PAK2Q13177 524 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 IWS1Q96ST2 819 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 USP44Q9H0E7 712 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
SHPRH-206ENST00000438092 NDUFA8P51970 172 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 FAM49AQ9H0Q0 323 aaPredicted RBP11.3□□□□□ -0.6
SHPRH-206ENST00000438092 VCX3BQ9H321 246 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 BAG2O95816 211 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 CDC25AP30304 524 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 BFSP1Q12934 665 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 ANKRD20A3Q5VUR7 823 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 MOSPD1Q9UJG1 213 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 WDR62O43379 1518 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 HOXB7P09629 217 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 ADALQ6DHV7 355 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 MIS18BP1Q6P0N0 1132 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 CACNA2D3Q8IZS8 1091 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 RIC8AQ9NPQ8 531 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 MED23Q9ULK4 1368 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 CTNNA1P35221 906 aaKnown RBP11.3□□□□□ -0.6
SHPRH-206ENST00000438092 METTL23Q86XA0 190 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 GBP7Q8N8V2 638 aaPredicted RBP11.3□□□□□ -0.6
SHPRH-206ENST00000438092 CEP170P1Q96L14 293 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 SLC38A10Q9HBR0 1119 aa11.3□□□□□ -0.6
SHPRH-206ENST00000438092 CASQ2O14958 399 aaPredicted RBP11.29□□□□□ -0.6
SHPRH-206ENST00000438092 RNF8O76064 485 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 RASSF7Q02833 373 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 JADE1Q6IE81 842 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 CCDC84Q86UT8 332 aaPredicted RBP11.29□□□□□ -0.6
SHPRH-206ENST00000438092 MIPOL1Q8TD10 442 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 ERO1AQ96HE7 468 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 CCNA1P78396 465 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 GRAMD1CQ8IYS0 662 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 CDC26Q8NHZ8 85 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 SLC10A4Q96EP9 437 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
SHPRH-206ENST00000438092 MAST1Q9Y2H9 1570 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 PIK3C2GO75747 1445 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 TYW5A2RUC4 315 aaKnown RBP11.29□□□□□ -0.6
SHPRH-206ENST00000438092 TTLL1O95922 423 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 CLCN1P35523 988 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 DALRD3Q5D0E6 543 aaKnown RBP11.29□□□□□ -0.6
SHPRH-206ENST00000438092 MAPKBP1O60336 1514 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 KIF21AQ7Z4S6 1674 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 ATP10AO60312 1499 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 ZBTB7AO95365 584 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 TUBB4AP04350 444 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 CCND2P30279 289 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 STAT2P52630 851 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 SCRN1Q12765 414 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 RINT1Q6NUQ1 792 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 RSRC1Q96IZ7 334 aaKnown RBP11.29□□□□□ -0.6
SHPRH-206ENST00000438092 ZNF668Q96K58 619 aaPredicted RBP11.29□□□□□ -0.6
SHPRH-206ENST00000438092 PIGSQ96S52 555 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 RAB17Q9H0T7 212 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 ANTXR1Q9H6X2 564 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 COL4A3BPQ9Y5P4 624 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 KIAA0556O60303 1618 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 BIVM-ERCC5R4GMW8 1640 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 YEATS2Q9ULM3 1422 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 UNC13AQ9UPW8 1703 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 DDIT3P35638 169 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 SESN3P58005 492 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 NFX1Q12986 1120 aaKnown RBP11.29□□□□□ -0.6
SHPRH-206ENST00000438092 HP1BP3Q5SSJ5 553 aaPredicted RBP11.29□□□□□ -0.6
SHPRH-206ENST00000438092 ANGPTL3Q9Y5C1 460 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 USP17L3A6NCW0 530 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 USP17L4A6NCW7 530 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 RFC1P35251 1148 aaPredicted RBP11.29□□□□□ -0.6
SHPRH-206ENST00000438092 KIF11P52732 1056 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 YWHAGP61981 247 aaKnown RBP eCLIP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms