RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 PDE4DQ08499 809 aa20.48■□□□□ 0.87
SBDSP1-203ENST00000437201 SART3Q15020 963 aaKnown RBP20.48■□□□□ 0.87
SBDSP1-203ENST00000437201 CDC37Q16543 378 aaPredicted RBP20.48■□□□□ 0.87
SBDSP1-203ENST00000437201 USH1GQ495M9 461 aa20.48■□□□□ 0.87
SBDSP1-203ENST00000437201 RALYLQ86SE5 291 aaKnown RBP20.48■□□□□ 0.87
SBDSP1-203ENST00000437201 MCF2L2Q86YR7 1114 aa20.48■□□□□ 0.87
SBDSP1-203ENST00000437201 MCM3APO60318 1980 aa20.47■□□□□ 0.87
SBDSP1-203ENST00000437201 ARVCFO00192 962 aa20.47■□□□□ 0.87
SBDSP1-203ENST00000437201 TLR3O15455 904 aaKnown RBP20.47■□□□□ 0.87
SBDSP1-203ENST00000437201 SGSM2O43147 1006 aa20.47■□□□□ 0.87
SBDSP1-203ENST00000437201 CDK7P50613 346 aa20.47■□□□□ 0.87
SBDSP1-203ENST00000437201 FAAP100Q0VG06 881 aa20.47■□□□□ 0.87
SBDSP1-203ENST00000437201 DUSP28Q4G0W2 176 aa20.47■□□□□ 0.87
SBDSP1-203ENST00000437201 SLC30A10Q6XR72 485 aa20.47■□□□□ 0.87
SBDSP1-203ENST00000437201 PURBQ96QR8 312 aaKnown RBP20.47■□□□□ 0.87
SBDSP1-203ENST00000437201 PDGFCQ9NRA1 345 aa20.47■□□□□ 0.87
SBDSP1-203ENST00000437201 CTAGE5O15320 804 aa20.46■□□□□ 0.87
SBDSP1-203ENST00000437201 CYP21A2P08686 494 aa20.46■□□□□ 0.87
SBDSP1-203ENST00000437201 BEX3Q00994 111 aa20.46■□□□□ 0.87
SBDSP1-203ENST00000437201 PTH1RQ03431 593 aa20.46■□□□□ 0.87
SBDSP1-203ENST00000437201 NCOA7Q8NI08 942 aa20.46■□□□□ 0.87
SBDSP1-203ENST00000437201 WDR11Q9BZH6 1224 aa20.46■□□□□ 0.87
SBDSP1-203ENST00000437201 MRPL11Q9Y3B7 192 aaKnown RBP20.46■□□□□ 0.87
SBDSP1-203ENST00000437201 SZT2Q5T011 3432 aa20.46■□□□□ 0.87
SBDSP1-203ENST00000437201 NKRFO15226 690 aaKnown RBP eCLIP20.45■□□□□ 0.86
SBDSP1-203ENST00000437201 TRAF1Q13077 416 aa20.45■□□□□ 0.86
SBDSP1-203ENST00000437201 SEC23AQ15436 765 aa20.45■□□□□ 0.86
SBDSP1-203ENST00000437201 BRDTQ58F21 947 aaPredicted RBP20.45■□□□□ 0.86
SBDSP1-203ENST00000437201 FBXO11Q86XK2 927 aa20.45■□□□□ 0.86
SBDSP1-203ENST00000437201 DEFB123Q8N688 67 aa20.45■□□□□ 0.86
SBDSP1-203ENST00000437201 CPVLQ9H3G5 476 aa20.45■□□□□ 0.86
SBDSP1-203ENST00000437201 VAT1LQ9HCJ6 419 aa20.45■□□□□ 0.86
SBDSP1-203ENST00000437201 RBM47A0AV96 593 aaKnown RBP20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 IFIT3O14879 490 aaKnown RBP20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 TIMP1P01033 207 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 IRX5P78411 483 aaPredicted RBP20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 FPGSQ05932 587 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 SHHQ15465 462 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 QRICH1Q2TAL8 776 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 CXCL17Q6UXB2 119 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 CYB5R4Q7L1T6 521 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 SCFD2Q8WU76 684 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 MAP4K1Q92918 833 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 AMNQ9BXJ7 453 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 JMJD4Q9H9V9 463 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 DDX49Q9Y6V7 483 aaKnown RBP20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 LAMA3Q16787 3333 aa20.44■□□□□ 0.86
SBDSP1-203ENST00000437201 LTBP2Q14767 1821 aa20.43■□□□□ 0.86
SBDSP1-203ENST00000437201 KLRF2D3W0D1 207 aa20.43■□□□□ 0.86
SBDSP1-203ENST00000437201 E7EWF7 191 aa20.43■□□□□ 0.86
SBDSP1-203ENST00000437201 EDNRBP24530 442 aa20.43■□□□□ 0.86
SBDSP1-203ENST00000437201 CPT1AP50416 773 aa20.43■□□□□ 0.86
SBDSP1-203ENST00000437201 NSUN6Q8TEA1 469 aaKnown RBP20.43■□□□□ 0.86
SBDSP1-203ENST00000437201 POLR3EQ9NVU0 708 aa20.43■□□□□ 0.86
SBDSP1-203ENST00000437201 TBX21Q9UL17 535 aa20.43■□□□□ 0.86
SBDSP1-203ENST00000437201 ITGB8P26012 769 aa20.42■□□□□ 0.86
SBDSP1-203ENST00000437201 ITGA7Q13683 1181 aa20.42■□□□□ 0.86
SBDSP1-203ENST00000437201 WTAPQ15007 396 aa20.42■□□□□ 0.86
SBDSP1-203ENST00000437201 PPP2R5BQ15173 497 aa20.42■□□□□ 0.86
SBDSP1-203ENST00000437201 FAM109BQ6ICB4 259 aaPredicted RBP20.42■□□□□ 0.86
SBDSP1-203ENST00000437201 IWS1Q96ST2 819 aa20.42■□□□□ 0.86
SBDSP1-203ENST00000437201 GPHNQ9NQX3 736 aaPredicted RBP20.42■□□□□ 0.86
SBDSP1-203ENST00000437201 PALM3A6NDB9 673 aaPredicted RBP20.41■□□□□ 0.86
SBDSP1-203ENST00000437201 TTLL4Q14679 1199 aa20.41■□□□□ 0.86
SBDSP1-203ENST00000437201 MFSD5Q6N075 450 aa20.41■□□□□ 0.86
SBDSP1-203ENST00000437201 FAM126BQ8IXS8 530 aa20.41■□□□□ 0.86
SBDSP1-203ENST00000437201 STAG2Q8N3U4 1231 aa20.41■□□□□ 0.86
SBDSP1-203ENST00000437201 SAMD3Q8N6K7 520 aa20.41■□□□□ 0.86
SBDSP1-203ENST00000437201 SLC43A3Q8NBI5 491 aa20.41■□□□□ 0.86
SBDSP1-203ENST00000437201 MAP3K20Q9NYL2 800 aaKnown RBP20.41■□□□□ 0.86
SBDSP1-203ENST00000437201 MAD2L2Q9UI95 211 aa20.41■□□□□ 0.86
SBDSP1-203ENST00000437201 ZBTB5O15062 677 aa20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 KPNA6O60684 536 aa20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 PPIGQ13427 754 aaKnown RBP eCLIP20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 C9orf50Q5SZB4 431 aa20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 CENPQQ7L2Z9 268 aaPredicted RBP20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 CATIPQ7Z7H3 387 aa20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 TMEM199Q8N511 208 aa20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 OR6J1Q8NGC5 347 aa20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 SYTL5Q8TDW5 730 aaPredicted RBP20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 RMDN3Q96TC7 470 aa20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 MTA3Q9BTC8 594 aa20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 RBM8AQ9Y5S9 174 aaKnown RBP20.4■□□□□ 0.86
SBDSP1-203ENST00000437201 LRRC37A2A6NM11 1700 aa20.39■□□□□ 0.86
SBDSP1-203ENST00000437201 CD4P01730 458 aa20.39■□□□□ 0.85
SBDSP1-203ENST00000437201 TXNP10599 105 aaKnown RBP20.39■□□□□ 0.85
SBDSP1-203ENST00000437201 GRM4Q14833 912 aa20.39■□□□□ 0.85
SBDSP1-203ENST00000437201 STXBP2Q15833 593 aa20.39■□□□□ 0.85
SBDSP1-203ENST00000437201 TMEM67Q5HYA8 995 aa20.39■□□□□ 0.85
SBDSP1-203ENST00000437201 ARHGEF16Q5VV41 709 aa20.39■□□□□ 0.85
SBDSP1-203ENST00000437201 MTMR8Q96EF0 704 aa20.39■□□□□ 0.85
SBDSP1-203ENST00000437201 RNPC3Q96LT9 517 aaKnown RBP20.39■□□□□ 0.85
SBDSP1-203ENST00000437201 PCDHA1Q9Y5I3 950 aa20.39■□□□□ 0.85
SBDSP1-203ENST00000437201 LCTP09848 1927 aa20.38■□□□□ 0.85
SBDSP1-203ENST00000437201 SMAD3P84022 425 aaKnown RBP20.38■□□□□ 0.85
SBDSP1-203ENST00000437201 TMEM63BQ5T3F8 832 aa20.38■□□□□ 0.85
SBDSP1-203ENST00000437201 CASC1Q6TDU7 716 aa20.38■□□□□ 0.85
SBDSP1-203ENST00000437201 Q7L0L9 218 aa20.38■□□□□ 0.85
SBDSP1-203ENST00000437201 TMTC2Q8N394 836 aa20.38■□□□□ 0.85
SBDSP1-203ENST00000437201 TAAR1Q96RJ0 339 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms