RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SLC26A6Q9BXS9 759 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 UBA5Q9GZZ9 404 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 KIAA1683Q9H0B3 1180 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 CPVLQ9H3G5 476 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 VCPKMTQ9H867 229 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 CHMP5Q9NZZ3 219 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 ORC3Q9UBD5 711 aaPredicted RBP8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 PCDHB9Q9Y5E1 797 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 ZHX2Q9Y6X8 837 aa8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 V9GY48 417 aaPredicted RBP8.15□□□□□ -1.1
LSM3P3-201ENST00000436601 SCN4AP35499 1836 aa8.15□□□□□ -1.11
LSM3P3-201ENST00000436601 CNTNAP5Q8WYK1 1306 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 STK36Q9NRP7 1315 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 hCG_1642624A0A1W2PR95 340 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 SMARCA1P28370 1054 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 SLC16A2P36021 539 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 SLC1A4P43007 532 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 PTK7Q13308 1070 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 DGKZQ13574 1117 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 NCOA4Q13772 614 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 ZYXQ15942 572 aaKnown RBP8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 GPATCH4Q5T3I0 446 aaKnown RBP8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 FOXD4L5Q5VV16 416 aaPredicted RBP8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 CST9Q5W186 159 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 LARP1BQ659C4 914 aaKnown RBP8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 KCTD1Q719H9 257 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 ARMC9Q7Z3E5 817 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 ANKRD13AQ8IZ07 590 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 DEPDC4Q8N2C3 294 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 FAM184AQ8NB25 1140 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 PLPP7Q8NBV4 271 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 ZNF280CQ8ND82 737 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 FOXD4L4Q8WXT5 416 aaPredicted RBP8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 SHISA4Q96DD7 197 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 OCSTAMPQ9BR26 566 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 SPZ1Q9BXG8 430 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 RNF26Q9BY78 433 aaPredicted RBP8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 RIOX1Q9H6W3 641 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 SH2D4AQ9H788 454 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 ZNF408Q9H9D4 720 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 GJB4Q9NTQ9 266 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 AFG3L2Q9Y4W6 797 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 CSADQ9Y600 493 aa8.14□□□□□ -1.11
LSM3P3-201ENST00000436601 GREB1LQ9C091 1923 aaPredicted RBP8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 TRIM75PA6NK02 468 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 STX6O43752 255 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 DEXIO95424 95 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 BMP3P12645 472 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 BACE1P56817 501 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 CCDC96Q2M329 555 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 EML3Q32P44 896 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 CRTC2Q53ET0 693 aaPredicted RBP8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 FAM83BQ5T0W9 1011 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 OTUD7BQ6GQQ9 843 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 BTNL9Q6UXG8 535 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 NYAP1Q6ZVC0 841 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 ADGRF4Q8IZF3 695 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 ADAM32Q8TC27 787 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 FAM200AQ8TCP9 573 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 PIBF1Q8WXW3 757 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 FEZ1Q99689 392 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 ARHGAP9Q9BRR9 750 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 ALG1Q9BT22 464 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 ELP3Q9H9T3 547 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 JMJD4Q9H9V9 463 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 AS3MTQ9HBK9 375 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 VAT1LQ9HCJ6 419 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 MTMR6Q9Y217 621 aa8.13□□□□□ -1.11
LSM3P3-201ENST00000436601 UNCXA6NJT0 531 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 C19orf81C9J6K1 198 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 TMEM232C9JQI7 657 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 CELF2O95319 508 aaKnown RBP8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 ZSCAN22P10073 491 aaPredicted RBP8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 PDCP20941 246 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 FKBP1BP68106 108 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 NUCB2P80303 420 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 GUCY1B3Q02153 619 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 PPATQ06203 517 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 PFKFB3Q16875 520 aaPredicted RBP8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 TRIM50Q86XT4 487 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 ERO1BQ86YB8 467 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 FBXO18Q8NFZ0 1043 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 WASF1Q92558 559 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 LPAR1Q92633 364 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 CLP1Q92989 425 aaKnown RBP8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 MTMR8Q96EF0 704 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 C12orf42Q96LP6 360 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 PIGSQ96S52 555 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 GBA2Q9HCG7 927 aaPredicted RBP8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 KIF3AQ9Y496 699 aa8.12□□□□□ -1.11
LSM3P3-201ENST00000436601 PASKQ96RG2 1323 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 WDR33Q9C0J8 1336 aaKnown RBP8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 VPS37CA5D8V6 355 aaPredicted RBP8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 WDR46O15213 610 aaKnown RBP8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 PLA2G6O60733 806 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 PPP1R11O60927 126 aaPredicted RBP8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 ADH1BP00325 375 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 SCG2P13521 617 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms