RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 NECTIN1Q15223 517 aa21.31■■□□□ 1
HMGN1-207ENST00000436324 GNASQ5JWF2 1037 aa21.31■■□□□ 1
HMGN1-207ENST00000436324 CCSAPQ6IQ19 270 aaPredicted RBP21.31■■□□□ 1
HMGN1-207ENST00000436324 HOMER1Q86YM7 354 aa21.31■■□□□ 1
HMGN1-207ENST00000436324 MORC4Q8TE76 937 aa21.31■■□□□ 1
HMGN1-207ENST00000436324 VTI1AQ96AJ9 217 aa21.31■■□□□ 1
HMGN1-207ENST00000436324 UPF3AQ9H1J1 476 aaKnown RBP21.31■■□□□ 1
HMGN1-207ENST00000436324 VTA1Q9NP79 307 aa21.31■■□□□ 1
HMGN1-207ENST00000436324 STARD7Q9NQZ5 370 aa21.31■■□□□ 1
HMGN1-207ENST00000436324 MRPL11Q9Y3B7 192 aaKnown RBP21.31■■□□□ 1
HMGN1-207ENST00000436324 DYNC1LI2O43237 492 aaPredicted RBP21.3■■□□□ 1
HMGN1-207ENST00000436324 TLE2Q04725 743 aa21.3■■□□□ 1
HMGN1-207ENST00000436324 PDE4DQ08499 809 aa21.3■■□□□ 1
HMGN1-207ENST00000436324 MAPK8IP2Q13387 824 aaPredicted RBP21.3■■□□□ 1
HMGN1-207ENST00000436324 SLC35G1Q2M3R5 365 aa21.3■■□□□ 1
HMGN1-207ENST00000436324 IQSEC1Q6DN90 963 aa21.3■■□□□ 1
HMGN1-207ENST00000436324 TLK2Q86UE8 772 aa21.3■■□□□ 1
HMGN1-207ENST00000436324 MYL10Q9BUA6 226 aa21.3■■□□□ 1
HMGN1-207ENST00000436324 UBE2OQ9C0C9 1292 aaKnown RBP21.3■■□□□ 1
HMGN1-207ENST00000436324 AP5M1Q9H0R1 490 aa21.3■■□□□ 1
HMGN1-207ENST00000436324 LY9Q9HBG7 655 aa21.3■■□□□ 1
HMGN1-207ENST00000436324 MOXD2PA6NHM9 499 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 ASGR1P07306 291 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 CST5P28325 142 aaPredicted RBP21.29■■□□□ 1
HMGN1-207ENST00000436324 MCM5P33992 734 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 TROAPQ12815 778 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 NFXL1Q6ZNB6 911 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 MCF2L2Q86YR7 1114 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 PCSK9Q8NBP7 692 aaKnown RBP21.29■■□□□ 1
HMGN1-207ENST00000436324 RGS22Q8NE09 1264 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 PIBF1Q8WXW3 757 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 TAAR1Q96RJ0 339 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 PIGSQ96S52 555 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 LBHD1Q9BQE6 289 aaPredicted RBP21.29■■□□□ 1
HMGN1-207ENST00000436324 AMNQ9BXJ7 453 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 LRRC2Q9BYS8 371 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 GNEQ9Y223 722 aaKnown RBP21.29■■□□□ 1
HMGN1-207ENST00000436324 LCTP09848 1927 aa21.29■■□□□ 1
HMGN1-207ENST00000436324 ZBTB5O15062 677 aa21.28■■□□□ 1
HMGN1-207ENST00000436324 CTAGE5O15320 804 aa21.28■■□□□ 1
HMGN1-207ENST00000436324 PQBP1O60828 265 aaKnown RBP21.28■■□□□ 1
HMGN1-207ENST00000436324 PPP1R11O60927 126 aaPredicted RBP21.28■■□□□ 1
HMGN1-207ENST00000436324 BMP8BP34820 402 aa21.28■■□□□ 1
HMGN1-207ENST00000436324 C1orf53Q5VUE5 145 aa21.28■■□□□ 1
HMGN1-207ENST00000436324 SH3RF1Q7Z6J0 888 aa21.28■■□□□ 1
HMGN1-207ENST00000436324 ZNF654Q8IZM8 581 aa21.28■■□□□ 1
HMGN1-207ENST00000436324 DNERQ8NFT8 737 aa21.28■■□□□ 1
HMGN1-207ENST00000436324 SYTL5Q8TDW5 730 aaPredicted RBP21.28■■□□□ 1
HMGN1-207ENST00000436324 MTMR8Q96EF0 704 aa21.28■■□□□ 1
HMGN1-207ENST00000436324 GLT1D1Q96MS3 346 aa21.28■■□□□ 1
HMGN1-207ENST00000436324 MPHOSPH6Q99547 160 aaKnown RBP21.28■■□□□ 1
HMGN1-207ENST00000436324 COL20A1Q9P218 1284 aa21.28■■□□□ 1
HMGN1-207ENST00000436324 LOC102724159A0A0B4J2E5 919 aa21.27■■□□□ 1
HMGN1-207ENST00000436324 CFBP00751 764 aa21.27■■□□□ 1
HMGN1-207ENST00000436324 PWP2Q15269 919 aaKnown RBP21.27■■□□□ 1
HMGN1-207ENST00000436324 RNF20Q5VTR2 975 aa21.27■■□□□ 1
HMGN1-207ENST00000436324 WDR11Q9BZH6 1224 aa21.27■■□□□ 1
HMGN1-207ENST00000436324 RIOX1Q9H6W3 641 aa21.27■■□□□ 1
HMGN1-207ENST00000436324 PDLIM7Q9NR12 457 aa21.27■■□□□ 1
HMGN1-207ENST00000436324 PCDHA1Q9Y5I3 950 aa21.27■■□□□ 1
HMGN1-207ENST00000436324 TRIOBPQ9H2D6 2365 aa21.27■■□□□ 1
HMGN1-207ENST00000436324 CCDC69A6NI79 296 aa21.26■□□□□ 0.99
HMGN1-207ENST00000436324 B4DLN1 442 aa21.26■□□□□ 0.99
HMGN1-207ENST00000436324 SH2B2O14492 632 aaPredicted RBP21.26■□□□□ 0.99
HMGN1-207ENST00000436324 CYTH3O43739 400 aa21.26■□□□□ 0.99
HMGN1-207ENST00000436324 MRPL12P52815 198 aaKnown RBP21.26■□□□□ 0.99
HMGN1-207ENST00000436324 FSCN1Q16658 493 aaKnown RBP21.26■□□□□ 0.99
HMGN1-207ENST00000436324 RAB11FIP4Q86YS3 637 aa21.26■□□□□ 0.99
HMGN1-207ENST00000436324 TMEM87BQ96K49 555 aa21.26■□□□□ 0.99
HMGN1-207ENST00000436324 A0A1W2PPC1 479 aa21.25■□□□□ 0.99
HMGN1-207ENST00000436324 TRIM43BA6NCK2 446 aa21.25■□□□□ 0.99
HMGN1-207ENST00000436324 LRRC37A2A6NM11 1700 aa21.25■□□□□ 0.99
HMGN1-207ENST00000436324 RXRAP19793 462 aa21.25■□□□□ 0.99
HMGN1-207ENST00000436324 EDNRBP24530 442 aa21.25■□□□□ 0.99
HMGN1-207ENST00000436324 DUSP28Q4G0W2 176 aa21.25■□□□□ 0.99
HMGN1-207ENST00000436324 CXCL17Q6UXB2 119 aa21.25■□□□□ 0.99
HMGN1-207ENST00000436324 CTCFLQ8NI51 663 aaPredicted RBP21.25■□□□□ 0.99
HMGN1-207ENST00000436324 TRIM43Q96BQ3 446 aaPredicted RBP21.25■□□□□ 0.99
HMGN1-207ENST00000436324 OPLAHO14841 1288 aa21.24■□□□□ 0.99
HMGN1-207ENST00000436324 DDAH1O94760 285 aa21.24■□□□□ 0.99
HMGN1-207ENST00000436324 CLTBP09497 229 aa21.24■□□□□ 0.99
HMGN1-207ENST00000436324 ARHGEF16Q5VV41 709 aa21.24■□□□□ 0.99
HMGN1-207ENST00000436324 RASEFQ8IZ41 740 aa21.24■□□□□ 0.99
HMGN1-207ENST00000436324 NSUN6Q8TEA1 469 aaKnown RBP21.24■□□□□ 0.99
HMGN1-207ENST00000436324 BADQ92934 168 aa21.24■□□□□ 0.99
HMGN1-207ENST00000436324 RMDN3Q96TC7 470 aa21.24■□□□□ 0.99
HMGN1-207ENST00000436324 MTA3Q9BTC8 594 aa21.24■□□□□ 0.99
HMGN1-207ENST00000436324 Q9Y3F1 56 aa21.24■□□□□ 0.99
HMGN1-207ENST00000436324 ELP1O95163 1332 aa21.24■□□□□ 0.99
HMGN1-207ENST00000436324 PNMA6FA0A0J9YX94 578 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 A0A0U1RQG5 324 aaPredicted RBP21.23■□□□□ 0.99
HMGN1-207ENST00000436324 RBM47A0AV96 593 aaKnown RBP21.23■□□□□ 0.99
HMGN1-207ENST00000436324 DCDC2CA8MYV0 355 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 ZEB2O60315 1214 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 EIF2AK2P19525 551 aaKnown RBP21.23■□□□□ 0.99
HMGN1-207ENST00000436324 HOXA13P31271 388 aaPredicted RBP21.23■□□□□ 0.99
HMGN1-207ENST00000436324 KIF5BP33176 963 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 NKX3-2P78367 333 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 SEPT14Q6ZU15 432 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 TDHQ8IZJ6 230 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms