RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 TDP2O95551 362 aa18.77■□□□□ 0.6
LIMK1-203ENST00000435201 CACNB3P54284 484 aa18.77■□□□□ 0.6
LIMK1-203ENST00000435201 TRIM65Q6PJ69 517 aa18.77■□□□□ 0.6
LIMK1-203ENST00000435201 ZSCAN29Q8IWY8 852 aaPredicted RBP18.77■□□□□ 0.6
LIMK1-203ENST00000435201 SLC37A4O43826 429 aa18.76■□□□□ 0.59
LIMK1-203ENST00000435201 COBLO75128 1261 aa18.76■□□□□ 0.59
LIMK1-203ENST00000435201 EEF2P13639 858 aaKnown RBP18.76■□□□□ 0.59
LIMK1-203ENST00000435201 GCFC2P16383 781 aaKnown RBP18.76■□□□□ 0.59
LIMK1-203ENST00000435201 RXRBP28702 533 aa18.76■□□□□ 0.59
LIMK1-203ENST00000435201 SLC16A2P36021 539 aa18.76■□□□□ 0.59
LIMK1-203ENST00000435201 ASIC1P78348 528 aa18.76■□□□□ 0.59
LIMK1-203ENST00000435201 TMEM179Q6ZVK1 233 aa18.76■□□□□ 0.59
LIMK1-203ENST00000435201 TAB2Q9NYJ8 693 aa18.76■□□□□ 0.59
LIMK1-203ENST00000435201 PCDHAC2Q9Y5I4 1007 aa18.76■□□□□ 0.59
LIMK1-203ENST00000435201 BICDL2A1A5D9 508 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 ENTPD3O75355 529 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 CHRNA5P30532 468 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 HOXA7P31268 230 aaPredicted RBP18.75■□□□□ 0.59
LIMK1-203ENST00000435201 SLC1A4P43007 532 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 PDE4DQ08499 809 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 COBLL1Q53SF7 1204 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 TOGARAM2Q6ZUX3 1019 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 SV2BQ7L1I2 683 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 SH3BP5LQ7L8J4 393 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 PDCL2Q8N4E4 241 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 C7orf43Q8WVR3 580 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 CDK5RAP3Q96JB5 506 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 TRIM47Q96LD4 638 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 VPS16Q9H269 839 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 PSTPIP2Q9H939 334 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 DNAI1Q9UI46 699 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 ZNF215Q9UL58 517 aaPredicted RBP18.75■□□□□ 0.59
LIMK1-203ENST00000435201 ATRNL1Q5VV63 1379 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 TRIM49BA6NDI0 452 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 EDIL3O43854 480 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 GYPCP04921 128 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 CCDC175P0C221 793 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 FECHP22830 423 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 CASP14P31944 242 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 GRB10Q13322 594 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 UBE2SQ16763 222 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 AOC3Q16853 763 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 SLFN13Q68D06 897 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 CNNM4Q6P4Q7 775 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 LRRC27Q9C0I9 530 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
LIMK1-203ENST00000435201 MAGEC2Q9UBF1 373 aaPredicted RBP18.75■□□□□ 0.59
LIMK1-203ENST00000435201 PSME4Q14997 1843 aa18.75■□□□□ 0.59
LIMK1-203ENST00000435201 CCNE1P24864 410 aa18.74■□□□□ 0.59
LIMK1-203ENST00000435201 ICA1Q05084 483 aa18.74■□□□□ 0.59
LIMK1-203ENST00000435201 SLC15A2Q16348 729 aa18.74■□□□□ 0.59
LIMK1-203ENST00000435201 CCDC93Q567U6 631 aa18.74■□□□□ 0.59
LIMK1-203ENST00000435201 KRT79Q5XKE5 535 aa18.74■□□□□ 0.59
LIMK1-203ENST00000435201 TTI2Q6NXR4 508 aa18.74■□□□□ 0.59
LIMK1-203ENST00000435201 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
LIMK1-203ENST00000435201 IRF2BP1Q8IU81 584 aa18.74■□□□□ 0.59
LIMK1-203ENST00000435201 DDX25Q9UHL0 483 aaKnown RBP18.74■□□□□ 0.59
LIMK1-203ENST00000435201 MYH7BA7E2Y1 1941 aa18.74■□□□□ 0.59
LIMK1-203ENST00000435201 QRICH1Q2TAL8 776 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 GMCL1P1Q8NEA9 526 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 CPLX3Q8WVH0 158 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 LARP4BQ92615 738 aaKnown RBP18.73■□□□□ 0.59
LIMK1-203ENST00000435201 P2RX5Q93086 422 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 PNMA5Q96PV4 448 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 ATF5Q9Y2D1 282 aaPredicted RBP18.73■□□□□ 0.59
LIMK1-203ENST00000435201 A0A1W2PQC6 194 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 FAM196BA6NMK8 535 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 LGALS16A8MUM7 142 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 SLURP2P0DP57 97 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 PMS1P54277 932 aaKnown RBP18.73■□□□□ 0.59
LIMK1-203ENST00000435201 UBXN1Q04323 297 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 ABCB5Q2M3G0 1257 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 GRIPAP1Q4V328 841 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 MCTP2Q6DN12 878 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 FAM114A1Q8IWE2 563 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 SRRTQ9BXP5 876 aaKnown RBP18.73■□□□□ 0.59
LIMK1-203ENST00000435201 BLOC1S4Q9NUP1 217 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 STK32BQ9NY57 414 aa18.73■□□□□ 0.59
LIMK1-203ENST00000435201 CGNQ9P2M7 1197 aaKnown RBP18.73■□□□□ 0.59
LIMK1-203ENST00000435201 PVALEFA0A1B0GWK0 134 aa18.72■□□□□ 0.59
LIMK1-203ENST00000435201 SOWAHDA6NJG2 315 aa18.72■□□□□ 0.59
LIMK1-203ENST00000435201 FXR1P51114 621 aaKnown RBP eCLIP18.72■□□□□ 0.59
LIMK1-203ENST00000435201 SEPT2Q15019 361 aa18.72■□□□□ 0.59
LIMK1-203ENST00000435201 CDC37Q16543 378 aaPredicted RBP18.72■□□□□ 0.59
LIMK1-203ENST00000435201 CREBRFQ8IUR6 639 aa18.72■□□□□ 0.59
LIMK1-203ENST00000435201 SNX29Q8TEQ0 813 aa18.72■□□□□ 0.59
LIMK1-203ENST00000435201 RAD21O60216 631 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 TMEM119Q4V9L6 283 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 UNC13DQ70J99 1090 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 TMTC1Q8IUR5 882 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 CSGALNACT2Q8N6G5 542 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 RAD54LQ92698 747 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 GMCL1Q96IK5 515 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 NUP88Q99567 741 aaPredicted RBP18.71■□□□□ 0.59
LIMK1-203ENST00000435201 CCDC94Q9BW85 323 aaPredicted RBP18.71■□□□□ 0.59
LIMK1-203ENST00000435201 ABHD10Q9NUJ1 306 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 PCDHA1Q9Y5I3 950 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 POTEMA6NI47 508 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 PPIP5K2O43314 1243 aa18.71■□□□□ 0.59
LIMK1-203ENST00000435201 SLC26A4O43511 780 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms