RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 RTP1P59025 263 aa15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 TSGA10IPQ3SY00 556 aa15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 IQSEC1Q6DN90 963 aa15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 CHRDL2Q6WN34 429 aa15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 SLC39A5Q6ZMH5 540 aa15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 FBXO16Q8IX29 292 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 PCSK9Q8NBP7 692 aaKnown RBP15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 FERMT2Q96AC1 680 aa15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 NEK1Q96PY6 1258 aa15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 PURBQ96QR8 312 aaKnown RBP15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 UPF3AQ9H1J1 476 aaKnown RBP15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 ZMYND8Q9ULU4 1186 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 COLQQ9Y215 455 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC4-202ENST00000434101 KIAA1217Q5T5P2 1943 aa15.33■□□□□ 0.05
TRAPPC4-202ENST00000434101 REC8O95072 547 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 CALM1P0DP23 149 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 CALM2P0DP24 149 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 CALM3P0DP25 149 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 GNAQP50148 359 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 PDE4DQ08499 809 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 HABP4Q5JVS0 413 aaKnown RBP15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 C1orf53Q5VUE5 145 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 EEPD1Q7L9B9 569 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 HOMER1Q86YM7 354 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 SAMD3Q8N6K7 520 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 KLHDC9Q8NEP7 349 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 LZTS2Q9BRK4 669 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 PCDHA1Q9Y5I3 950 aa15.33■□□□□ 0.04
TRAPPC4-202ENST00000434101 PNMA6FA0A0J9YX94 578 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 A0A1W2PQ45 241 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 A0A1W2PQY0 241 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 ADCY6O43306 1168 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 SMARCA1P28370 1054 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 ACLYP53396 1101 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 SNX17Q15036 470 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 TAPT1Q6NXT6 567 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 SYNE3Q6ZMZ3 975 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 SYTL5Q8TDW5 730 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 NSUN6Q8TEA1 469 aaKnown RBP15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 PIGSQ96S52 555 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 AP5M1Q9H0R1 490 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 GPHNQ9NQX3 736 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 MAP3K20Q9NYL2 800 aaKnown RBP15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 PRKAG2Q9UGJ0 569 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 ATP11BQ9Y2G3 1177 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 Q9Y3F1 56 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 SLC12A7Q9Y666 1083 aa15.32■□□□□ 0.04
TRAPPC4-202ENST00000434101 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 ZEB2O60315 1214 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 CFBP00751 764 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 HMGB1P09429 215 aaKnown RBP15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 SMPD1P17405 629 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 SYN1P17600 705 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 EDNRBP24530 442 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 NKX3-2P78367 333 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 KCNA10Q16322 511 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 GNASQ5JWF2 1037 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 DHX32Q7L7V1 743 aaKnown RBP15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 TLK2Q86UE8 772 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 SGMS1Q86VZ5 419 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 GLT1D1Q96MS3 346 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 MYL10Q9BUA6 226 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 SPZ1Q9BXG8 430 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 STARD7Q9NQZ5 370 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 PDGFCQ9NRA1 345 aa15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 GNEQ9Y223 722 aaKnown RBP15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 DDX49Q9Y6V7 483 aaKnown RBP15.31■□□□□ 0.04
TRAPPC4-202ENST00000434101 A0A1W2PPC1 479 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 RBM47A0AV96 593 aaKnown RBP15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 MYADML2A6NDP7 307 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 CYTH3O43739 400 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 PPP1R11O60927 126 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 GHRHRQ02643 423 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 SLC35G1Q2M3R5 365 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 TRIM60Q495X7 471 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 DUSP28Q4G0W2 176 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 CCSAPQ6IQ19 270 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 RASEFQ8IZ41 740 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 TBC1D5Q92609 795 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 RRP36Q96EU6 259 aaKnown RBP15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 IWS1Q96ST2 819 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 RMDN3Q96TC7 470 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 LRRC2Q9BYS8 371 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 WDR11Q9BZH6 1224 aa15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 RBM27Q9P2N5 1060 aaKnown RBP15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 SEC63Q9UGP8 760 aaKnown RBP15.3■□□□□ 0.04
TRAPPC4-202ENST00000434101 ELP1O95163 1332 aa15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 NKRFO15226 690 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 DYNC1LI2O43237 492 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 EPB41L2O43491 1005 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 ASGR1P07306 291 aa15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 HSPA4P34932 840 aa15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 HSD17B4P51659 736 aa15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 FSCN1Q16658 493 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 ARHGEF16Q5VV41 709 aa15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 KCNB2Q92953 911 aa15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 VTI1AQ96AJ9 217 aa15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 TAAR1Q96RJ0 339 aa15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 GDF15Q99988 308 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms