RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PDE6BP35913 854 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 ANKRD40Q6AI12 368 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 THEMISQ8N1K5 641 aaPredicted RBP12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 THAP9Q9H5L6 903 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 CYP2D7A0A087X1C5 515 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 ARID5AQ03989 594 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 PDE4DQ08499 809 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 SPATA5Q8NB90 893 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 PURBQ96QR8 312 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 LRP2BPQ9P2M1 347 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 SOS2Q07890 1332 aaPredicted RBP12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 ANKRD18BA2A2Z9 1011 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 GMNCA6NCL1 334 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 EPHB6O15197 1021 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 QPCTQ16769 361 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 CACNA2D4Q7Z3S7 1137 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 CPLX4Q7Z7G2 160 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 FUKQ8N0W3 1084 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 CASKIN2Q8WXE0 1202 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 ESR2Q92731 530 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 TLR10Q9BXR5 811 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 TANGO6Q9C0B7 1094 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 TPX2Q9ULW0 747 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 GCOM1H8Y6P7 765 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 PCCAP05165 728 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 MYZAPP0CAP1 466 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 GCFC2P16383 781 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 EHHADHQ08426 723 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 YTHDF3Q7Z739 585 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 MTMR8Q96EF0 704 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 OSBPL7Q9BZF2 842 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 TTYH3Q9C0H2 523 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 ABCF2Q9UG63 623 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 NFAT5O94916 1531 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 TTI2Q6NXR4 508 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 PIK3R5Q8WYR1 880 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 NOX5Q96PH1 765 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 RNF41Q9H4P4 317 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 NLRC4Q9NPP4 1024 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 C5P01031 1676 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 PDE8BO95263 885 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 FCER1AP12319 257 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 ITGB3BPQ13352 177 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 ALX1Q15699 326 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 NAIF1Q69YI7 327 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 ZNF662Q6ZS27 426 aa12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 DDX42Q86XP3 938 aaKnown RBP eCLIP12.78□□□□□ -0.365e-42■□□□□ 11
HMGCS1-202ENST00000433297 UBLCP1Q8WVY7 318 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 DUSP9Q99956 384 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-202ENST00000433297 LRRC53A6NM62 1247 aa12.77□□□□□ -0.36
HMGCS1-202ENST00000433297 PHF20L1A8MW92 1017 aa12.77□□□□□ -0.36
HMGCS1-202ENST00000433297 CTNNA1P35221 906 aaKnown RBP12.77□□□□□ -0.36
HMGCS1-202ENST00000433297 SLC1A4P43007 532 aa12.77□□□□□ -0.36
HMGCS1-202ENST00000433297 ASIC1P78348 528 aa12.77□□□□□ -0.36
HMGCS1-202ENST00000433297 DTHD1Q6ZMT9 781 aa12.77□□□□□ -0.36
HMGCS1-202ENST00000433297 ENAHQ8N8S7 591 aaPredicted RBP12.77□□□□□ -0.36
HMGCS1-202ENST00000433297 RETREG2Q8NC44 543 aa12.77□□□□□ -0.36
HMGCS1-202ENST00000433297 PYM1Q9BRP8 204 aaKnown RBP12.77□□□□□ -0.36
HMGCS1-202ENST00000433297 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.77□□□□□ -0.362e-12■□□□□ 8.7
HMGCS1-202ENST00000433297 A0A1B0GUA9 196 aa12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 HMGB1P1B2RPK0 211 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 PRPF3O43395 683 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 C21orf2O43822 256 aa12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 STK4Q13043 487 aa12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 PPP1R7Q15435 360 aa12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 SLC4A8Q2Y0W8 1093 aa12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 MSL1Q68DK7 614 aa12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 FAM228AQ86W67 206 aa12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 ARFGAP2Q8N6H7 521 aa12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 P2RX5Q93086 422 aa12.77□□□□□ -0.37
HMGCS1-202ENST00000433297 PALMO75781 387 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 SATB1Q01826 763 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 RASGRF1Q13972 1273 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 KLHDC7AQ5VTJ3 777 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 HIBCHQ6NVY1 386 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 KRT28Q7Z3Y7 464 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 PNMA8AQ86V59 439 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 CACNA2D3Q8IZS8 1091 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 SGSM3Q96HU1 749 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 NOVA2Q9UNW9 492 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 ATXN2Q99700 1313 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 CCDC189A1A4V9 331 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 PRLRP16471 622 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 TEX11Q8IYF3 940 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 CCDC155Q8N6L0 562 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 THOC1Q96FV9 657 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 SEC16BQ96JE7 1060 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 ZSCAN10Q96SZ4 725 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 SLC39A2Q9NP94 309 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 MYH10P35580 1976 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 SPATA31A3Q5VYP0 1347 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 MARF1Q9Y4F3 1742 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 UQCRFS1P1P0C7P4 283 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 TCP11Q8WWU5 503 aa12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 CCDC47Q96A33 483 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-202ENST00000433297 GDF3Q9NR23 364 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms