RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 MRPL44Q9H9J2 332 aaKnown RBP16.49■□□□□ 0.23
RFTN1-203ENST00000432519 RIC8AQ9NPQ8 531 aa16.49■□□□□ 0.23
RFTN1-203ENST00000432519 SRCAPQ6ZRS2 3230 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 ZBTB5O15062 677 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 C21orf2O43822 256 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 MTMR8Q96EF0 704 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 WDR24Q96S15 920 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 IDI2Q9BXS1 227 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 SMCHD1A6NHR9 2005 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 MCM6Q14566 821 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 KCNB1Q14721 858 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 QRICH1Q2TAL8 776 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 HAS1Q92839 578 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 DUSP9Q99956 384 aaKnown RBP16.48■□□□□ 0.23
RFTN1-203ENST00000432519 PI4KBQ9UBF8 816 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 LRWD1Q9UFC0 647 aa16.48■□□□□ 0.23
RFTN1-203ENST00000432519 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
RFTN1-203ENST00000432519 MFAP3LO75121 409 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 RXRBP28702 533 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 PDE4DQ08499 809 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 TTI2Q6NXR4 508 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 SRRTQ9BXP5 876 aaKnown RBP16.47■□□□□ 0.23
RFTN1-203ENST00000432519 MYMKA6NI61 221 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 SLC1A4P43007 532 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 ASIC1P78348 528 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 SLC15A2Q16348 729 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 CCDC93Q567U6 631 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 GPATCH4Q5T3I0 446 aaKnown RBP16.47■□□□□ 0.23
RFTN1-203ENST00000432519 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
RFTN1-203ENST00000432519 CTAGE1Q96RT6 745 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 L2HGDHQ9H9P8 463 aa16.47■□□□□ 0.23
RFTN1-203ENST00000432519 ABL1P00519 1130 aa16.46■□□□□ 0.23
RFTN1-203ENST00000432519 SLFN13Q68D06 897 aa16.46■□□□□ 0.23
RFTN1-203ENST00000432519 TATDN1Q6P1N9 297 aa16.46■□□□□ 0.23
RFTN1-203ENST00000432519 DYMQ7RTS9 669 aa16.46■□□□□ 0.23
RFTN1-203ENST00000432519 KIAA0895Q8NCT3 520 aa16.46■□□□□ 0.23
RFTN1-203ENST00000432519 GLIS3Q8NEA6 775 aa16.46■□□□□ 0.23
RFTN1-203ENST00000432519 PSTPIP2Q9H939 334 aa16.46■□□□□ 0.23
RFTN1-203ENST00000432519 hCG_1984214I3L0E3 225 aa16.46■□□□□ 0.23
RFTN1-203ENST00000432519 PPFIBP1Q86W92 1011 aa16.46■□□□□ 0.23
RFTN1-203ENST00000432519 ZNF713Q8N859 430 aaPredicted RBP16.46■□□□□ 0.23
RFTN1-203ENST00000432519 CCDC17Q96LX7 622 aa16.46■□□□□ 0.23
RFTN1-203ENST00000432519 FILIP1LQ4L180 1135 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 ANKRD40Q6AI12 368 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 CDAN1Q8IWY9 1227 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 PANX2Q96RD6 677 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 C7orf25Q9BPX7 421 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 DHX36Q9H2U1 1008 aaKnown RBP16.45■□□□□ 0.22
RFTN1-203ENST00000432519 SLC39A2Q9NP94 309 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 A0A1W2PRG0 241 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 KIF2AO00139 706 aaPredicted RBP16.45■□□□□ 0.22
RFTN1-203ENST00000432519 FXR2P51116 673 aaKnown RBP eCLIP16.45■□□□□ 0.22
RFTN1-203ENST00000432519 ERVK-24P63145 666 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 ICA1Q05084 483 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 ELF2Q15723 593 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 PDCL2Q8N4E4 241 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 CUL5Q93034 780 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 MKL1Q969V6 931 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 TRIM47Q96LD4 638 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 MRIQ9BWK5 157 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.45■□□□□ 0.22
RFTN1-203ENST00000432519 SERPINA10Q9UK55 444 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 PCDHA1Q9Y5I3 950 aa16.45■□□□□ 0.22
RFTN1-203ENST00000432519 F5H6K3 240 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 PPIP5K2O43314 1243 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 GH2P01242 217 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 UBXN1Q04323 297 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 KLRC3Q07444 240 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
RFTN1-203ENST00000432519 FCHSD1Q86WN1 690 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 SPICE1Q8N0Z3 855 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 KANSL2Q9H9L4 492 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 DDX25Q9UHL0 483 aaKnown RBP16.44■□□□□ 0.22
RFTN1-203ENST00000432519 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
RFTN1-203ENST00000432519 ARFGEF1Q9Y6D6 1849 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 CLRN2A0PK11 232 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 H7C1D1 291 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 PPP4R3BQ5MIZ7 849 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 SNX29Q8TEQ0 813 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 RGS17Q9UGC6 210 aaPredicted RBP16.44■□□□□ 0.22
RFTN1-203ENST00000432519 C10orf71Q711Q0 1435 aa16.44■□□□□ 0.22
RFTN1-203ENST00000432519 RAD17O75943 681 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 SLU7O95391 586 aaKnown RBP16.43■□□□□ 0.22
RFTN1-203ENST00000432519 KLK7P49862 253 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 HDLBPQ00341 1268 aaKnown RBP16.43■□□□□ 0.22
RFTN1-203ENST00000432519 CNKSR1Q969H4 720 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 CALML4Q96GE6 196 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 CUEDC2Q9H467 287 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 LZTFL1Q9NQ48 299 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 EXOC1Q9NV70 894 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 NYAP2Q9P242 653 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 ZBTB12Q9Y330 459 aaPredicted RBP16.43■□□□□ 0.22
RFTN1-203ENST00000432519 ADGRG1Q9Y653 693 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 COL4A5P29400 1685 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 TCP10L2B9ZVM9 353 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 PES1O00541 588 aaKnown RBP16.43■□□□□ 0.22
RFTN1-203ENST00000432519 PSMA7O14818 248 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 ZSCAN12O43309 604 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 NDUFB10O96000 172 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 MYL1P05976 194 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms