RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 RTP1P59025 263 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 TROAPQ12815 778 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 NFXL1Q6ZNB6 911 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 RNF207Q6ZRF8 634 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 TCEANC2Q96MN5 208 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 MAP3K14Q99558 947 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 AGXT2Q9BYV1 514 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 MCM3APO60318 1980 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 LRRC37A2A6NM11 1700 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 ASB14A6NK59 587 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 KLRF2D3W0D1 207 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 C6orf222P0C671 652 aaPredicted RBP13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 RPS6P62753 249 aaKnown RBP13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 QRICH1Q2TAL8 776 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 Q6ZUG5 572 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 HOMER1Q86YM7 354 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 ZNF654Q8IZM8 581 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 NUP133Q8WUM0 1156 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 PIBF1Q8WXW3 757 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 MYL10Q9BUA6 226 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 KATNBL1Q9H079 304 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 ALDH8A1Q9H2A2 487 aaPredicted RBP13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 JMJD4Q9H9V9 463 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 PRDM5Q9NQX1 630 aaPredicted RBP13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 ADD3Q9UEY8 706 aaKnown RBP13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 MAD2L2Q9UI95 211 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 BAZ2BQ9UIF8 2168 aaKnown RBP13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 LCTP09848 1927 aa13.82□□□□□ -0.2
TRERNA1-201ENST00000431460 SMCHD1A6NHR9 2005 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 ADAMTS4O75173 837 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 CALM1P0DP23 149 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 CALM2P0DP24 149 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 CALM3P0DP25 149 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 ALDH5A1P51649 535 aaPredicted RBP13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 FGD1P98174 961 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 TNFAIP2Q03169 654 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 GRM4Q14833 912 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 TRIM60Q495X7 471 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 FBXO11Q86XK2 927 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 RAB11FIP4Q86YS3 637 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 UPF3BQ9BZI7 483 aaKnown RBP13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 PDGFCQ9NRA1 345 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 PNMA2Q9UL42 364 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 SLC12A7Q9Y666 1083 aa13.81□□□□□ -0.2
TRERNA1-201ENST00000431460 A0A1W2PQ45 241 aaPredicted RBP13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 A0A1W2PQY0 241 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 DUSP11O75319 330 aaKnown RBP13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 MAGEA10P43363 369 aaPredicted RBP13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 RCAN1P53805 252 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 EVCP57679 992 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 MDM2Q00987 491 aaPredicted RBP13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 BEX3Q00994 111 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 TMEM63BQ5T3F8 832 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 APOA5Q6Q788 366 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 SLC39A5Q6ZMH5 540 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 SYNE3Q6ZMZ3 975 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 TBC1D5Q92609 795 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 BRF1Q92994 677 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 KIF2CQ99661 725 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 SPC25Q9HBM1 224 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 PDRG1Q9NUG6 133 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 BRPF3Q9ULD4 1205 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 PHF24Q9UPV7 400 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 ABCB11O95342 1321 aa13.8□□□□□ -0.2
TRERNA1-201ENST00000431460 RXRAP19793 462 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 KIF5BP33176 963 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 ACLYP53396 1101 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 PDE4DQ08499 809 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 TOB2Q14106 344 aaPredicted RBP13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 KCNA10Q16322 511 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 FANCBQ8NB91 859 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 CTCFLQ8NI51 663 aaPredicted RBP13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 VTI1AQ96AJ9 217 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 TBC1D32Q96NH3 1257 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 PIGSQ96S52 555 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 PRKAG2Q9UGJ0 569 aa13.79□□□□□ -0.2
TRERNA1-201ENST00000431460 MYH6P13533 1939 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 DNAH12Q6ZR08 3092 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 KLF18A0A0U1RQI7 1052 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 ZBTB43O43298 467 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 PQBP1O60828 265 aaKnown RBP13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 PPP1R11O60927 126 aaPredicted RBP13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 CFBP00751 764 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 SMPD1P17405 629 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 SMARCA1P28370 1054 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 GNAQP50148 359 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 APOBRQ0VD83 1088 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 PPP2R5BQ15173 497 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 SLC35G1Q2M3R5 365 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 GNASQ5JWF2 1037 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 TLK2Q86UE8 772 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 KLHDC9Q8NEP7 349 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 AMNQ9BXJ7 453 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 VTA1Q9NP79 307 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 STARD7Q9NQZ5 370 aa13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 MRPL11Q9Y3B7 192 aaKnown RBP13.78□□□□□ -0.2
TRERNA1-201ENST00000431460 ZBTB5O15062 677 aa13.77□□□□□ -0.21
TRERNA1-201ENST00000431460 DYNC1LI2O43237 492 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms