RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 YBX3P16989 372 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 BPIP17213 487 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 NAT1P18440 290 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 ENDOUP21128 410 aaKnown RBP4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 MECP2P51608 486 aaKnown RBP4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 PCBP3P57721 371 aaKnown RBP4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 IFI16Q16666 785 aaKnown RBP4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 MSMPQ1L6U9 139 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 INF2Q27J81 1249 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 CLEC16AQ2KHT3 1053 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 IQCEQ6IPM2 695 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 ZCCHC8Q6NZY4 707 aaKnown RBP4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 LBX2Q6XYB7 198 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 KIF18BQ86Y91 864 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 IFNL3Q8IZI9 196 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 PLD6Q8N2A8 252 aaKnown RBP4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 RCBTB1Q8NDN9 531 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 NETO1Q8TDF5 533 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 MAGEB10Q96LZ2 347 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 PTCHD1Q96NR3 888 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 G6PC3Q9BUM1 346 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 PHF20Q9BVI0 1012 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 FOXP3Q9BZS1 431 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 ERVK13-1Q9NX77 482 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 CLEC1BQ9P126 229 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 KLHL42Q9P2K6 505 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 TRBV23OR9-2A0A075B6M9 112 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 TMEM265A0A087WTH1 108 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 B4E1Z4 1266 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 H3BS24 57 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 NFKB2Q00653 900 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 EXOSC10Q01780 885 aaKnown RBP4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 CDKAL1Q5VV42 579 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 CDCA2Q69YH5 1023 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 CNNM4Q6P4Q7 775 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 UBR7Q8N806 425 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 PCDH19Q8TAB3 1148 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 DIO2Q92813 273 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 UBE2FQ969M7 185 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 OSBPL1AQ9BXW6 950 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 CELF4Q9BZC1 486 aaKnown RBP4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 AP5S1Q9NUS5 200 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 ZC3H7BQ9UGR2 993 aaKnown RBP4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 PCDHA9Q9Y5H5 950 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 PCDHA11Q9Y5I1 949 aa4.43□□□□□ -1.7
HMGB1P27-201ENST00000431429 ALG1L2C9J202 215 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 CBX4O00257 560 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 TRAF5O00463 557 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 DYRK3O43781 588 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 OPA1O60313 960 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 GSTM1P09488 218 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 JMJD7P0C870 316 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 PAMP19021 973 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 CNGA1P29973 690 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 SEPHS1P49903 392 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 DSG1Q02413 1049 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 BRDTQ58F21 947 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 HABP4Q5JVS0 413 aaKnown RBP4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 CREB3L3Q68CJ9 461 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 CYP2R1Q6VVX0 501 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 LHFPL2Q6ZUX7 228 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 DDX46Q7L014 1031 aaKnown RBP4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 NECAB2Q7Z6G3 386 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 KSR1Q8IVT5 923 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 FCRL2Q96LA5 508 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 HOMER2Q9NSB8 354 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 ATG3Q9NT62 314 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 PIM2Q9P1W9 311 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 ZSWIM5Q9P217 1185 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 DUSP13Q9UII6 198 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 MCM8Q9UJA3 840 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 FBXL7Q9UJT9 491 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 THRAP3Q9Y2W1 955 aaKnown RBP4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 PCDHA8Q9Y5H6 950 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 WASHC2CQ9Y4E1 1318 aa4.42□□□□□ -1.7
HMGB1P27-201ENST00000431429 C7orf72A4D263 438 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 K7ESF4 209 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 CYP26A1O43174 497 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 GPR39O43194 453 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 GLRX3O76003 335 aaKnown RBP4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 F2P00734 622 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 HOXA10P31260 410 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 EVA1CP58658 441 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 GUCY1A3Q02108 690 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 PRKCQQ04759 706 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 KIZQ2M2Z5 673 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 ZPBP2Q6X784 338 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 OTOP1Q7RTM1 612 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 OVCH1Q7RTY7 1134 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 NLRP10Q86W26 655 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 NLGN2Q8NFZ4 835 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 LINC01599Q8WXQ3 324 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 DPF3Q92784 378 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 ATP13A1Q9HD20 1204 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 CRTAC1Q9NQ79 661 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 EBF1Q9UH73 591 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 ADGRE2Q9UHX3 823 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 VAV3Q9UKW4 847 aa4.41□□□□□ -1.7
HMGB1P27-201ENST00000431429 NPHP3-ACAD11A0A0J9YXS1 232 aa4.4□□□□□ -1.71
HMGB1P27-201ENST00000431429 FADS2P1A8MWK0 482 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms