RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 GNEQ9Y223 722 aaKnown RBP11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 TNKSO95271 1327 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 RAD50Q92878 1312 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 NKX3-2P78367 333 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 FPGSQ05932 587 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 CDC37Q16543 378 aaPredicted RBP11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 FSCN1Q16658 493 aaKnown RBP11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 USH1GQ495M9 461 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 CXCL17Q6UXB2 119 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 ENAHQ8N8S7 591 aaPredicted RBP11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 MORC4Q8TE76 937 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 CLEC4DQ8WXI8 215 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 UBAC1Q9BSL1 405 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 KRT23Q9C075 422 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 AP5M1Q9H0R1 490 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 TBX21Q9UL17 535 aa11.89□□□□□ -0.51
HMGN1P38-201ENST00000431116 DNAH12Q6ZR08 3092 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 ARVCFO00192 962 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 DYNC1LI2O43237 492 aaPredicted RBP11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 DHX16O60231 1041 aaKnown RBP11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 EPHB4P54760 987 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 RPS6P62753 249 aaKnown RBP11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 TMEM63BQ5T3F8 832 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 IQSEC1Q6DN90 963 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 TAPT1Q6NXT6 567 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 KIAA1211Q6ZU35 1233 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 RNPC3Q96LT9 517 aaKnown RBP11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 MPHOSPH6Q99547 160 aaKnown RBP11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 UBA5Q9GZZ9 404 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 CNNM2Q9H8M5 875 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 MTMR10Q9NXD2 777 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 KIAA1217Q5T5P2 1943 aa11.88□□□□□ -0.51
HMGN1P38-201ENST00000431116 LOC102724159A0A0B4J2E5 919 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 TLR3O15455 904 aaKnown RBP11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 ZEB2O60315 1214 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 CABYRO75952 493 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 PARP1P09874 1014 aaKnown RBP11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 CDK7P50613 346 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 PDE4DQ08499 809 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 PWP2Q15269 919 aaKnown RBP11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 ASPRV1Q53RT3 343 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 ZNF697Q5TEC3 545 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 FAM126BQ8IXS8 530 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 ANKS1AQ92625 1134 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 FAM161BQ96MY7 647 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 ZSWIM5Q9P217 1185 aa11.87□□□□□ -0.51
HMGN1P38-201ENST00000431116 TIMP1P01033 207 aa11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 DUSP28Q4G0W2 176 aa11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 IFIT1BQ5T764 474 aaKnown RBP11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 FAM109BQ6ICB4 259 aaPredicted RBP11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 ADGRF4Q8IZF3 695 aa11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 RUFY2Q8WXA3 655 aa11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 GUCD1Q96NT3 240 aa11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 WDR11Q9BZH6 1224 aa11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 PPP1R12CQ9BZL4 782 aa11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 STXBP5LQ9Y2K9 1186 aa11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 Q9Y3F1 56 aa11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 ABCB11O95342 1321 aa11.86□□□□□ -0.51
HMGN1P38-201ENST00000431116 BAZ2BQ9UIF8 2168 aaKnown RBP11.85□□□□□ -0.51
HMGN1P38-201ENST00000431116 SCN10AQ9Y5Y9 1956 aa11.85□□□□□ -0.51
HMGN1P38-201ENST00000431116 CHMLP26374 656 aa11.85□□□□□ -0.51
HMGN1P38-201ENST00000431116 PSMC6P62333 389 aa11.85□□□□□ -0.51
HMGN1P38-201ENST00000431116 TRDNQ13061 729 aa11.85□□□□□ -0.51
HMGN1P38-201ENST00000431116 ITGA7Q13683 1181 aa11.85□□□□□ -0.51
HMGN1P38-201ENST00000431116 PPP2R5BQ15173 497 aa11.85□□□□□ -0.51
HMGN1P38-201ENST00000431116 QRICH1Q2TAL8 776 aa11.85□□□□□ -0.51
HMGN1P38-201ENST00000431116 MFSD5Q6N075 450 aa11.85□□□□□ -0.51
HMGN1P38-201ENST00000431116 DNERQ8NFT8 737 aa11.85□□□□□ -0.51
HMGN1P38-201ENST00000431116 RBM47A0AV96 593 aaKnown RBP11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 B4DLN1 442 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 CD4P01730 458 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 CYP21A2P08686 494 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 PRR29P0C7W0 189 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 CSF2RAP15509 400 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 EDNRBP24530 442 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 CPT1AP50416 773 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 MRPL12P52815 198 aaKnown RBP11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 SMAD3P84022 425 aaKnown RBP11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 PTH1RQ03431 593 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 PPIGQ13427 754 aaKnown RBP eCLIP11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 SEC23AQ15436 765 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 CYB5R4Q7L1T6 521 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 STAG2Q8N3U4 1231 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 TMEM199Q8N511 208 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 SLC43A3Q8NBI5 491 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 SLC17A8Q8NDX2 589 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 RGS22Q8NE09 1264 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 OR6J1Q8NGC5 347 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 SCFD2Q8WU76 684 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 JMJD4Q9H9V9 463 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 VAT1LQ9HCJ6 419 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 GBF1Q92538 1859 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 GRIN2DO15399 1336 aa11.84□□□□□ -0.51
HMGN1P38-201ENST00000431116 TANC1Q9C0D5 1861 aa11.83□□□□□ -0.52
HMGN1P38-201ENST00000431116 MYL3P08590 195 aa11.83□□□□□ -0.52
HMGN1P38-201ENST00000431116 CYP2C18P33260 490 aa11.83□□□□□ -0.52
HMGN1P38-201ENST00000431116 RALYLQ86SE5 291 aaKnown RBP11.83□□□□□ -0.52
HMGN1P38-201ENST00000431116 FBXO11Q86XK2 927 aa11.83□□□□□ -0.52
HMGN1P38-201ENST00000431116 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.52
HMGN1P38-201ENST00000431116 SYTL5Q8TDW5 730 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms