RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 DHX32Q7L7V1 743 aaKnown RBP11.4□□□□□ -0.58
HDAC6-207ENST00000430858 SAMD3Q8N6K7 520 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 KLHDC9Q8NEP7 349 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 LENG1Q96BZ8 264 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-207ENST00000430858 LZTS2Q9BRK4 669 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 GPHNQ9NQX3 736 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-207ENST00000430858 MAP3K20Q9NYL2 800 aaKnown RBP11.4□□□□□ -0.58
HDAC6-207ENST00000430858 SLC12A7Q9Y666 1083 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 FRMPD3Q5JV73 1810 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 PNMA6FA0A0J9YX94 578 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-207ENST00000430858 EPB41L2O43491 1005 aaKnown RBP11.39□□□□□ -0.59
HDAC6-207ENST00000430858 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-207ENST00000430858 EDNRBP24530 442 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 HSPA4P34932 840 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 ADCYAP1R1P41586 468 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 GJA9P57773 515 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 NKX3-2P78367 333 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 COL9A3Q14050 684 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-207ENST00000430858 SNX17Q15036 470 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 SLC35G1Q2M3R5 365 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 ADCK5Q3MIX3 580 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 C1orf53Q5VUE5 145 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 TAPT1Q6NXT6 567 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 SLC39A5Q6ZMH5 540 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 NOL8Q76FK4 1167 aaKnown RBP11.39□□□□□ -0.59
HDAC6-207ENST00000430858 EEPD1Q7L9B9 569 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 SGMS1Q86VZ5 419 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 HOMER1Q86YM7 354 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 FBXO16Q8IX29 292 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-207ENST00000430858 RASEFQ8IZ41 740 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 PCSK9Q8NBP7 692 aaKnown RBP11.39□□□□□ -0.59
HDAC6-207ENST00000430858 SYTL5Q8TDW5 730 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-207ENST00000430858 KCNB2Q92953 911 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 PIGSQ96S52 555 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 MYL10Q9BUA6 226 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 UPF3AQ9H1J1 476 aaKnown RBP11.39□□□□□ -0.59
HDAC6-207ENST00000430858 GNEQ9Y223 722 aaKnown RBP11.39□□□□□ -0.59
HDAC6-207ENST00000430858 Q9Y3F1 56 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 PCDHA1Q9Y5I3 950 aa11.39□□□□□ -0.59
HDAC6-207ENST00000430858 ADCY6O43306 1168 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 PPP1R11O60927 126 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-207ENST00000430858 SMPD1P17405 629 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 ACLYP53396 1101 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 RTP1P59025 263 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 EXOSC10Q01780 885 aaKnown RBP11.38□□□□□ -0.59
HDAC6-207ENST00000430858 GHRHRQ02643 423 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 PDE4DQ08499 809 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 KCNA10Q16322 511 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 CCSAPQ6IQ19 270 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-207ENST00000430858 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 SYNE3Q6ZMZ3 975 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 TLK2Q86UE8 772 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 NSUN6Q8TEA1 469 aaKnown RBP11.38□□□□□ -0.59
HDAC6-207ENST00000430858 TBC1D5Q92609 795 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 IWS1Q96ST2 819 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 SPZ1Q9BXG8 430 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 LRRC2Q9BYS8 371 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 PDGFCQ9NRA1 345 aa11.38□□□□□ -0.59
HDAC6-207ENST00000430858 ZMYND8Q9ULU4 1186 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-207ENST00000430858 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-207ENST00000430858 DDX49Q9Y6V7 483 aaKnown RBP11.38□□□□□ -0.59
HDAC6-207ENST00000430858 SMCHD1A6NHR9 2005 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 A0A1W2PQ45 241 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-207ENST00000430858 A0A1W2PQY0 241 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 RBM47A0AV96 593 aaKnown RBP11.37□□□□□ -0.59
HDAC6-207ENST00000430858 MYADML2A6NDP7 307 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 OPLAHO14841 1288 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 CFBP00751 764 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 HSD17B4P51659 736 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 DUSP28Q4G0W2 176 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 HABP4Q5JVS0 413 aaKnown RBP11.37□□□□□ -0.59
HDAC6-207ENST00000430858 GNASQ5JWF2 1037 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 ARHGEF16Q5VV41 709 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 RRP36Q96EU6 259 aaKnown RBP11.37□□□□□ -0.59
HDAC6-207ENST00000430858 GLT1D1Q96MS3 346 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 TAAR1Q96RJ0 339 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 RMDN3Q96TC7 470 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 WDR11Q9BZH6 1224 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 AP5M1Q9H0R1 490 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 STARD7Q9NQZ5 370 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 COL20A1Q9P218 1284 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 ATP11BQ9Y2G3 1177 aa11.37□□□□□ -0.59
HDAC6-207ENST00000430858 ELP1O95163 1332 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 GCOM1H8Y6P7 765 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-207ENST00000430858 NKRFO15226 690 aaKnown RBP eCLIP11.36□□□□□ -0.59
HDAC6-207ENST00000430858 CTAGE5O15320 804 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 DYNC1LI2O43237 492 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-207ENST00000430858 ZEB2O60315 1214 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 ASGR1P07306 291 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 POLR2MP0CAP2 368 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 SYN1P17600 705 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 RXRAP19793 462 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 TRIM60Q495X7 471 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 APOA5Q6Q788 366 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 MICU3Q86XE3 530 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 SRBD1Q8N5C6 995 aaKnown RBP11.36□□□□□ -0.59
HDAC6-207ENST00000430858 FANCBQ8NB91 859 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 SCFD2Q8WU76 684 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms