RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 HOMER1Q86YM7 354 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 FBXL16Q8N461 479 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 FANCBQ8NB91 859 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 CLEC4DQ8WXI8 215 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 DDX11Q96FC9 970 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 TM6SF1Q9BZW5 370 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 KIAA0100Q14667 2235 aaKnown RBP13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 ZBTB5O15062 677 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 CALM1P0DP23 149 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 CALM2P0DP24 149 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 CALM3P0DP25 149 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 KIF5BP33176 963 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 FGD1P98174 961 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 CNTN2Q02246 1040 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 APOBRQ0VD83 1088 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 SRBD1Q8N5C6 995 aaKnown RBP13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 SYAP1Q96A49 352 aaPredicted RBP13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 FGD4Q96M96 766 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 PIGSQ96S52 555 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 RNF208Q9H0X6 261 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 CYP39A1Q9NYL5 469 aa13.4□□□□□ -0.26
PABPC1P11-201ENST00000428966 MSNP26038 577 aaKnown RBP13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 TOB2Q14106 344 aaPredicted RBP13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 LRSAM1Q6UWE0 723 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 NSMFQ6X4W1 530 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 TRMT44Q8IYL2 757 aaKnown RBP13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 GPT2Q8TD30 523 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 SLC5A4Q9NY91 659 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 CYP46A1Q9Y6A2 500 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 ASTN1O14525 1302 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 SMCHD1A6NHR9 2005 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 ZBTB43O43298 467 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 FBXO11Q86XK2 927 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 CCDC82Q8N4S0 544 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 FAM133AQ8N9E0 248 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 PIBF1Q8WXW3 757 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 PURBQ96QR8 312 aaKnown RBP13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 SPZ1Q9BXG8 430 aa13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 PAK6Q9NQU5 681 aaPredicted RBP13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 FAM217BQ9NTX9 383 aaPredicted RBP13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 DIS3Q9Y2L1 958 aaKnown RBP13.39□□□□□ -0.27
PABPC1P11-201ENST00000428966 RPTORQ8N122 1335 aa13.38□□□□□ -0.27
PABPC1P11-201ENST00000428966 SYNE3Q6ZMZ3 975 aa13.38□□□□□ -0.27
PABPC1P11-201ENST00000428966 TMTC3Q6ZXV5 915 aa13.38□□□□□ -0.27
PABPC1P11-201ENST00000428966 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
PABPC1P11-201ENST00000428966 PNMA2Q9UL42 364 aa13.38□□□□□ -0.27
PABPC1P11-201ENST00000428966 PFASO15067 1338 aa13.38□□□□□ -0.27
PABPC1P11-201ENST00000428966 OPLAHO14841 1288 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 CDC27P30260 824 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 CCND3P30281 292 aaPredicted RBP13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 BAATQ14032 418 aaPredicted RBP13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 MFSD14CQ5VZR4 134 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 SLC30A10Q6XR72 485 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 TRPV1Q8NER1 839 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 TBC1D5Q92609 795 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 TINF2Q9BSI4 451 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 AMNQ9BXJ7 453 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 hCG_1642624A0A1W2PR95 340 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 SOWAHBA6NEL2 793 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 GOLGA8BA8MQT2 603 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 TPM2P07951 284 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 GJB1P08034 283 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 CYBAP13498 195 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 EN2P19622 333 aaPredicted RBP13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 SMARCA1P28370 1054 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 GNAQP50148 359 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 EVCP57679 992 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 RPS6P62753 249 aaKnown RBP13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 FUT2Q10981 343 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 PRAMEF19Q5SWL8 479 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 PDLIM2Q96JY6 352 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 DEFB118Q96PH6 123 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 RBSNQ9H1K0 784 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 NAP1L2Q9ULW6 460 aaPredicted RBP13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 PCDHA1Q9Y5I3 950 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 DNAH12Q6ZR08 3092 aa13.37□□□□□ -0.27
PABPC1P11-201ENST00000428966 BAZ2BQ9UIF8 2168 aaKnown RBP13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 PTPDC1A2A3K4 754 aa13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 GOLGA8AA7E2F4 631 aa13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 ADD1P35611 737 aaKnown RBP13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 RCAN1P53805 252 aa13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 RTN1Q16799 776 aa13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 MAMDC4Q6UXC1 1216 aa13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 SHISA4Q96DD7 197 aa13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 LZTS2Q9BRK4 669 aa13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 ABCB11O95342 1321 aa13.36□□□□□ -0.27
PABPC1P11-201ENST00000428966 SNAI1O95863 264 aaPredicted RBP13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 GJA8P48165 433 aa13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 METAP2P50579 478 aaKnown RBP eCLIP13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 RNF207Q6ZRF8 634 aa13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
PABPC1P11-201ENST00000428966 PDRG1Q9NUG6 133 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms