RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 MAP3K14Q99558 947 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 AMNQ9BXJ7 453 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 SENP6Q9GZR1 1112 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-210ENST00000428861 XPNPEP3Q9NQH7 507 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 DNAH12Q6ZR08 3092 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 LRRC37A2A6NM11 1700 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 SYNRGQ9UMZ2 1314 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 ASB14A6NK59 587 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 CTAGE5O15320 804 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-210ENST00000428861 EDNRBP24530 442 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 TMTC2Q8N394 836 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 KLHDC9Q8NEP7 349 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 TAAR1Q96RJ0 339 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 HTATIP2Q9BUP3 242 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 FAM184BQ9ULE4 1060 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 PCDHA1Q9Y5I3 950 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 SLC12A7Q9Y666 1083 aa12.48□□□□□ -0.41
ATG4B-210ENST00000428861 CEP290O15078 2479 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 PNMA6FA0A0J9YX94 578 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 hCG_1642624A0A1W2PR95 340 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 DUSP11O75319 330 aaKnown RBP12.47□□□□□ -0.41
ATG4B-210ENST00000428861 REC8O95072 547 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 SMPD1P17405 629 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-210ENST00000428861 KRT32Q14532 448 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 CCSAPQ6IQ19 270 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-210ENST00000428861 APOA5Q6Q788 366 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 MICU3Q86XE3 530 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 FANCBQ8NB91 859 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 ARRDC4Q8NCT1 418 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 CTCFLQ8NI51 663 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-210ENST00000428861 FERMT2Q96AC1 680 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 SPZ1Q9BXG8 430 aa12.47□□□□□ -0.41
ATG4B-210ENST00000428861 FAM217BQ9NTX9 383 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-210ENST00000428861 GNEQ9Y223 722 aaKnown RBP12.47□□□□□ -0.41
ATG4B-210ENST00000428861 MRPL11Q9Y3B7 192 aaKnown RBP12.47□□□□□ -0.41
ATG4B-210ENST00000428861 EVI5O60447 810 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 CFBP00751 764 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 HOXA13P31271 388 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-210ENST00000428861 KIF5BP33176 963 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 HSD17B4P51659 736 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 GHRHRQ02643 423 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 FUT2Q10981 343 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 Q6ZUG5 572 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 TMTC3Q6ZXV5 915 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 C7orf61Q8IZ16 206 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 CCDC82Q8N4S0 544 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 UPF3AQ9H1J1 476 aaKnown RBP12.46□□□□□ -0.41
ATG4B-210ENST00000428861 ADD3Q9UEY8 706 aaKnown RBP12.46□□□□□ -0.41
ATG4B-210ENST00000428861 PHF24Q9UPV7 400 aa12.46□□□□□ -0.41
ATG4B-210ENST00000428861 KLF18A0A0U1RQI7 1052 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 KBTBD13C9JR72 458 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 SEC24BO95487 1268 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 RPS6KB1P23443 525 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 SMARCA1P28370 1054 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 CDC27P30260 824 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 GJA9P57773 515 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 TNFAIP2Q03169 654 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 APOBRQ0VD83 1088 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 KCNA10Q16322 511 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 MCF2L2Q86YR7 1114 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 DNERQ8NFT8 737 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 VTA1Q9NP79 307 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 ZMYND8Q9ULU4 1186 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-210ENST00000428861 RANBP2P49792 3224 aaKnown RBP12.45□□□□□ -0.42
ATG4B-210ENST00000428861 MYH6P13533 1939 aa12.45□□□□□ -0.42
ATG4B-210ENST00000428861 CNTNAP5Q8WYK1 1306 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 LOC102724159A0A0B4J2E5 919 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 A0A1W2PQ45 241 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-210ENST00000428861 A0A1W2PQY0 241 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 RBM47A0AV96 593 aaKnown RBP12.44□□□□□ -0.42
ATG4B-210ENST00000428861 ZBTB43O43298 467 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 EPB41L2O43491 1005 aaKnown RBP12.44□□□□□ -0.42
ATG4B-210ENST00000428861 ARIH2O95376 493 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
ATG4B-210ENST00000428861 CALM1P0DP23 149 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 CALM2P0DP24 149 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 CALM3P0DP25 149 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 SYN1P17600 705 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 EIF2AK2P19525 551 aaKnown RBP12.44□□□□□ -0.42
ATG4B-210ENST00000428861 CASTP20810 708 aaKnown RBP12.44□□□□□ -0.42
ATG4B-210ENST00000428861 GNAQP50148 359 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 NKX3-2P78367 333 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 BEX3Q00994 111 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 SNX17Q15036 470 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 PWP2Q15269 919 aaKnown RBP12.44□□□□□ -0.42
ATG4B-210ENST00000428861 BLOC1S2Q6QNY1 142 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 SLC39A5Q6ZMH5 540 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 RNF180Q86T96 592 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 IL31RAQ8NI17 732 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 COPS5Q92905 334 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 BRF1Q92994 677 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 RMDN3Q96TC7 470 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 LZTS2Q9BRK4 669 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 AGXT2Q9BYV1 514 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 ZSWIM6Q9HCJ5 1215 aa12.44□□□□□ -0.42
ATG4B-210ENST00000428861 DYNC1LI2O43237 492 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-210ENST00000428861 C6orf222P0C671 652 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms