RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 RBM27Q9P2N5 1060 aaKnown RBP25.76■■□□□ 1.71
PTPN18-205ENST00000428843 CD2BP2O95400 341 aaKnown RBP25.75■■□□□ 1.71
PTPN18-205ENST00000428843 CFBP00751 764 aa25.75■■□□□ 1.71
PTPN18-205ENST00000428843 HMGCRP04035 888 aa25.75■■□□□ 1.71
PTPN18-205ENST00000428843 TRIM32Q13049 653 aa25.75■■□□□ 1.71
PTPN18-205ENST00000428843 PKN1Q16512 942 aa25.75■■□□□ 1.71
PTPN18-205ENST00000428843 OLFML2BQ68BL8 750 aa25.75■■□□□ 1.71
PTPN18-205ENST00000428843 ZSCAN31Q96LW9 406 aaPredicted RBP25.75■■□□□ 1.71
PTPN18-205ENST00000428843 PURBQ96QR8 312 aaKnown RBP25.75■■□□□ 1.71
PTPN18-205ENST00000428843 BIN2Q9UBW5 565 aaPredicted RBP25.75■■□□□ 1.71
PTPN18-205ENST00000428843 HTTP42858 3142 aa25.74■■□□□ 1.71
PTPN18-205ENST00000428843 SOWAHBA6NEL2 793 aa25.74■■□□□ 1.71
PTPN18-205ENST00000428843 CDKL5O76039 1030 aa25.74■■□□□ 1.71
PTPN18-205ENST00000428843 CTDNEP1O95476 244 aa25.74■■□□□ 1.71
PTPN18-205ENST00000428843 IGHA2P01877 340 aa25.74■■□□□ 1.71
PTPN18-205ENST00000428843 INHAP05111 366 aa25.74■■□□□ 1.71
PTPN18-205ENST00000428843 SCG2P13521 617 aa25.74■■□□□ 1.71
PTPN18-205ENST00000428843 ST3GAL1Q11201 340 aa25.74■■□□□ 1.71
PTPN18-205ENST00000428843 TRIM22Q8IYM9 498 aa25.74■■□□□ 1.71
PTPN18-205ENST00000428843 ARMC5Q96C12 935 aa25.74■■□□□ 1.71
PTPN18-205ENST00000428843 hCG_1984214I3L0E3 225 aa25.73■■□□□ 1.71
PTPN18-205ENST00000428843 STXBP3O00186 592 aa25.73■■□□□ 1.71
PTPN18-205ENST00000428843 HSD17B4P51659 736 aa25.73■■□□□ 1.71
PTPN18-205ENST00000428843 GHRHRQ02643 423 aa25.73■■□□□ 1.71
PTPN18-205ENST00000428843 ZNF467Q7Z7K2 595 aaPredicted RBP25.73■■□□□ 1.71
PTPN18-205ENST00000428843 ZNF713Q8N859 430 aaPredicted RBP25.73■■□□□ 1.71
PTPN18-205ENST00000428843 SH2B1Q9NRF2 756 aaPredicted RBP25.73■■□□□ 1.71
PTPN18-205ENST00000428843 BARHL2Q9NY43 387 aa25.73■■□□□ 1.71
PTPN18-205ENST00000428843 ASTN1O14525 1302 aa25.72■■□□□ 1.71
PTPN18-205ENST00000428843 DTNBO60941 627 aa25.72■■□□□ 1.71
PTPN18-205ENST00000428843 CYP2C19P33261 490 aa25.72■■□□□ 1.71
PTPN18-205ENST00000428843 MFSD14CQ5VZR4 134 aa25.72■■□□□ 1.71
PTPN18-205ENST00000428843 TYW1BQ6NUM6 668 aa25.72■■□□□ 1.71
PTPN18-205ENST00000428843 CCDC83Q8IWF9 413 aa25.72■■□□□ 1.71
PTPN18-205ENST00000428843 SAMD3Q8N6K7 520 aa25.72■■□□□ 1.71
PTPN18-205ENST00000428843 SYTL5Q8TDW5 730 aaPredicted RBP25.72■■□□□ 1.71
PTPN18-205ENST00000428843 ZNF333Q96JL9 665 aa25.72■■□□□ 1.71
PTPN18-205ENST00000428843 COL20A1Q9P218 1284 aa25.72■■□□□ 1.71
PTPN18-205ENST00000428843 MCM3APO60318 1980 aa25.72■■□□□ 1.71
PTPN18-205ENST00000428843 GCOM1H8Y6P7 765 aaPredicted RBP25.71■■□□□ 1.71
PTPN18-205ENST00000428843 POLR2MP0CAP2 368 aa25.71■■□□□ 1.71
PTPN18-205ENST00000428843 HOXA13P31271 388 aaPredicted RBP25.71■■□□□ 1.71
PTPN18-205ENST00000428843 NAPAP54920 295 aa25.71■■□□□ 1.71
PTPN18-205ENST00000428843 UBXN2AP68543 259 aa25.71■■□□□ 1.71
PTPN18-205ENST00000428843 PPP1R18Q6NYC8 613 aa25.71■■□□□ 1.71
PTPN18-205ENST00000428843 ABHD8Q96I13 439 aa25.71■■□□□ 1.71
PTPN18-205ENST00000428843 TINF2Q9BSI4 451 aa25.71■■□□□ 1.71
PTPN18-205ENST00000428843 MAP3K20Q9NYL2 800 aaKnown RBP25.71■■□□□ 1.71
PTPN18-205ENST00000428843 DEXIO95424 95 aa25.7■■□□□ 1.7
PTPN18-205ENST00000428843 MCM2P49736 904 aa25.7■■□□□ 1.7
PTPN18-205ENST00000428843 CACNB2Q08289 660 aaPredicted RBP25.7■■□□□ 1.7
PTPN18-205ENST00000428843 MAMDC4Q6UXC1 1216 aa25.7■■□□□ 1.7
PTPN18-205ENST00000428843 MSL3Q8N5Y2 521 aaKnown RBP25.7■■□□□ 1.7
PTPN18-205ENST00000428843 NSUN7Q8NE18 718 aaKnown RBP25.7■■□□□ 1.7
PTPN18-205ENST00000428843 PSTPIP2Q9H939 334 aa25.7■■□□□ 1.7
PTPN18-205ENST00000428843 ADD3Q9UEY8 706 aaKnown RBP25.7■■□□□ 1.7
PTPN18-205ENST00000428843 STK36Q9NRP7 1315 aa25.69■■□□□ 1.7
PTPN18-205ENST00000428843 MYCP01106 439 aaPredicted RBP25.69■■□□□ 1.7
PTPN18-205ENST00000428843 PRKAR2AP13861 404 aaKnown RBP25.69■■□□□ 1.7
PTPN18-205ENST00000428843 ALDH5A1P51649 535 aaPredicted RBP25.69■■□□□ 1.7
PTPN18-205ENST00000428843 MAP3K21Q5TCX8 1036 aa25.69■■□□□ 1.7
PTPN18-205ENST00000428843 DNERQ8NFT8 737 aa25.69■■□□□ 1.7
PTPN18-205ENST00000428843 TAAR1Q96RJ0 339 aa25.69■■□□□ 1.7
PTPN18-205ENST00000428843 SYNGAP1Q96PV0 1343 aa25.68■■□□□ 1.7
PTPN18-205ENST00000428843 ASB14A6NK59 587 aa25.68■■□□□ 1.7
PTPN18-205ENST00000428843 MTFR1Q15390 333 aa25.68■■□□□ 1.7
PTPN18-205ENST00000428843 CUL5Q93034 780 aa25.68■■□□□ 1.7
PTPN18-205ENST00000428843 DDX49Q9Y6V7 483 aaKnown RBP25.68■■□□□ 1.7
PTPN18-205ENST00000428843 PIK3CDO00329 1044 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 MEIS2O14770 477 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 JAK2O60674 1132 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 SNAI1O95863 264 aaPredicted RBP25.67■■□□□ 1.7
PTPN18-205ENST00000428843 USP17L6PQ6QN14 398 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 ARMCX2Q7L311 632 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 FCHSD1Q86WN1 690 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 SMARCC2Q8TAQ2 1214 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 SHISA4Q96DD7 197 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 TMX3Q96JJ7 454 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 AIFM3Q96NN9 605 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 UNC93B1Q9H1C4 597 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 VPS54Q9P1Q0 977 aa25.67■■□□□ 1.7
PTPN18-205ENST00000428843 ORC3Q9UBD5 711 aaPredicted RBP25.67■■□□□ 1.7
PTPN18-205ENST00000428843 SMCO2A6NFE2 343 aa25.66■■□□□ 1.7
PTPN18-205ENST00000428843 CCL5P13501 91 aa25.66■■□□□ 1.7
PTPN18-205ENST00000428843 ADCY7P51828 1080 aa25.66■■□□□ 1.7
PTPN18-205ENST00000428843 UBE2SQ16763 222 aa25.66■■□□□ 1.7
PTPN18-205ENST00000428843 PRAMEF19Q5SWL8 479 aa25.66■■□□□ 1.7
PTPN18-205ENST00000428843 TRPV1Q8NER1 839 aa25.66■■□□□ 1.7
PTPN18-205ENST00000428843 RMDN3Q96TC7 470 aa25.66■■□□□ 1.7
PTPN18-205ENST00000428843 RIC8AQ9NPQ8 531 aa25.66■■□□□ 1.7
PTPN18-205ENST00000428843 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.66■■□□□ 1.7
PTPN18-205ENST00000428843 RPTORQ8N122 1335 aa25.65■■□□□ 1.7
PTPN18-205ENST00000428843 LOC102724159A0A0B4J2E5 919 aa25.65■■□□□ 1.7
PTPN18-205ENST00000428843 CYBAP13498 195 aa25.65■■□□□ 1.7
PTPN18-205ENST00000428843 FDPSP14324 419 aaKnown RBP25.65■■□□□ 1.7
PTPN18-205ENST00000428843 CCND3P30281 292 aaPredicted RBP25.65■■□□□ 1.7
PTPN18-205ENST00000428843 PWP2Q15269 919 aaKnown RBP25.65■■□□□ 1.7
PTPN18-205ENST00000428843 MORC4Q8TE76 937 aa25.65■■□□□ 1.7
PTPN18-205ENST00000428843 NSUN6Q8TEA1 469 aaKnown RBP25.65■■□□□ 1.7
PTPN18-205ENST00000428843 CCDC12Q8WUD4 166 aaPredicted RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms