RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 DEXIO95424 95 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 GAS8O95995 478 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 PLCB3Q01970 1234 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 GABPAQ06546 454 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 FAM102BQ5T8I3 360 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 TTC22Q5TAA0 569 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 SAMD7Q7Z3H4 446 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 FILIP1Q7Z7B0 1213 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 RNF180Q86T96 592 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 YAF2Q8IY57 180 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 TEKT3Q9BXF9 490 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 GTPBP4Q9BZE4 634 aaKnown RBP8.06□□□□□ -1.12
CNOT4-206ENST00000428680 MAF1Q9H063 256 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 ANO10Q9NW15 660 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 LRWD1Q9UFC0 647 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 SMCO2A6NFE2 343 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 SPDYE2BA6NHP3 402 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 USP17L15C9J2P7 530 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 USP17L13C9JLJ4 530 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 USP17L11C9JVI0 530 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 USP17L18D6R9N7 530 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 USP17L22D6RA61 530 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 USP17L17D6RBQ6 530 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 USP17L19D6RCP7 530 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 USP17L20D6RJB6 530 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 OATP04181 439 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 SPDYE6P0CI01 402 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 KRT5P13647 590 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 IGFBP4P22692 258 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 USP17L24Q0WX57 530 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 CST9Q5W186 159 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 IFNL1Q8IU54 200 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 ARRDC4Q8NCT1 418 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 TDRD7Q8NHU6 1098 aaKnown RBP8.06□□□□□ -1.12
CNOT4-206ENST00000428680 SNX29Q8TEQ0 813 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 ERCC4Q92889 916 aaPredicted RBP8.06□□□□□ -1.12
CNOT4-206ENST00000428680 CCDC114Q96M63 670 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 MMS19Q96T76 1030 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 INPP5FQ9Y2H2 1132 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.06□□□□□ -1.127e-7■□□□□ 9.6
CNOT4-206ENST00000428680 YEATS4O95619 227 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 XRCC6P12956 609 aaKnown RBP eCLIP8.06□□□□□ -1.12
CNOT4-206ENST00000428680 TNNI1P19237 187 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 HMGCS2P54868 508 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 APOBRQ0VD83 1088 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 TTLL4Q14679 1199 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 PRAMEF18Q5VWM3 479 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 SNRNP48Q6IEG0 339 aaKnown RBP8.06□□□□□ -1.12
CNOT4-206ENST00000428680 FAM177A1Q8N128 213 aaPredicted RBP8.06□□□□□ -1.12
CNOT4-206ENST00000428680 MYCT1Q8N699 235 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 TRPM4Q8TD43 1214 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 FAM151AQ8WW52 585 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 SLC8A2Q9UPR5 921 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 FAM155AB1AL88 458 aaPredicted RBP8.06□□□□□ -1.12
CNOT4-206ENST00000428680 NDC80O14777 642 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 AKR1B10O60218 316 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 MSCO60682 206 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 SLU7O95391 586 aaKnown RBP8.06□□□□□ -1.12
CNOT4-206ENST00000428680 CCND2P30279 289 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 SYKP43405 635 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 LIG4P49917 911 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 PIK3AP1Q6ZUJ8 805 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 NECAB1Q8N987 351 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 ZDHHC15Q96MV8 337 aa8.06□□□□□ -1.12
CNOT4-206ENST00000428680 ASB14A6NK59 587 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 BIN1O00499 593 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 CAPN9O14815 690 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 GJB2P29033 226 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 PLCD1P51178 756 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 PPP2R5AQ15172 486 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 CATSPER4Q7RTX7 472 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 TSPY26PQ9H489 355 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 ZSCAN16Q9H4T2 348 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-206ENST00000428680 TTC12Q9H892 705 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-206ENST00000428680 ARGLU1Q9NWB6 273 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-206ENST00000428680 SPDYE5A6NIY4 337 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 DCAF17Q5H9S7 520 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-206ENST00000428680 IQUBQ8NA54 791 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 DHX58Q96C10 678 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 ARID3AQ99856 593 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 RNF208Q9H0X6 261 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 GOLGA6L9A6NEM1 432 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 TNNC2P02585 160 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 GOLGA8HP0CJ92 632 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 STAT3P40763 770 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 ZNF174Q15697 407 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 IQCEQ6IPM2 695 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 MIS18BP1Q6P0N0 1132 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 PDXDC2PQ6P474 469 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 RNF207Q6ZRF8 634 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 NUDT18Q6ZVK8 323 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 SOCS4Q8WXH5 440 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 HERC5Q9UII4 1024 aaKnown RBP8.05□□□□□ -1.12
CNOT4-206ENST00000428680 HPS5Q9UPZ3 1129 aa8.05□□□□□ -1.12
CNOT4-206ENST00000428680 N4BP3O15049 544 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 TBC1D12O60347 775 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 RAG1P15918 1043 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 EIF2AK2P19525 551 aaKnown RBP8.04□□□□□ -1.12
CNOT4-206ENST00000428680 CAMK4Q16566 473 aa8.04□□□□□ -1.12
CNOT4-206ENST00000428680 CALCRLQ16602 461 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms