RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.63□□□□□ -0.87
CSTF1-203ENST00000428552 CYP39A1Q9NYL5 469 aa9.63□□□□□ -0.87
CSTF1-203ENST00000428552 SYNPO2Q9UMS6 1093 aa9.63□□□□□ -0.87
CSTF1-203ENST00000428552 PLIN4Q96Q06 1357 aa9.63□□□□□ -0.87
CSTF1-203ENST00000428552 USP34Q70CQ2 3546 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 RBM47A0AV96 593 aaKnown RBP9.62□□□□□ -0.87
CSTF1-203ENST00000428552 TMEM232C9JQI7 657 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 PITPNM1O00562 1244 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 ZEB2O60315 1214 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 PRDM1O75626 825 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 SUPT20HL2P0C7V6 817 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 BMP3P12645 472 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 RFC2P35250 354 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 SNAP25P60880 206 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 NHLH1Q02575 133 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 NBPF20Q3BBV1 942 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 IFNLR1Q8IU57 520 aaPredicted RBP9.62□□□□□ -0.87
CSTF1-203ENST00000428552 RPAP2Q8IXW5 612 aaPredicted RBP9.62□□□□□ -0.87
CSTF1-203ENST00000428552 AMOTL1Q8IY63 956 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 CLASRPQ8N2M8 674 aaKnown RBP9.62□□□□□ -0.87
CSTF1-203ENST00000428552 ANKS1AQ92625 1134 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 KIF1BPQ96EK5 621 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 TRERF1Q96PN7 1200 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 UBE2ZQ9H832 354 aaPredicted RBP9.62□□□□□ -0.87
CSTF1-203ENST00000428552 VTA1Q9NP79 307 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 LMCD1Q9NZU5 365 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 COG6Q9Y2V7 657 aa9.62□□□□□ -0.87
CSTF1-203ENST00000428552 IFIT2P09913 472 aaKnown RBP9.61□□□□□ -0.87
CSTF1-203ENST00000428552 ACTN1P12814 892 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 IL9P15248 144 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 WDR5P61964 334 aaKnown RBP9.61□□□□□ -0.87
CSTF1-203ENST00000428552 DEFB103AP81534 67 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 LEXMQ3ZCV2 418 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 SLFN13Q68D06 897 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 GIMAP6Q6P9H5 292 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 KIAA1211Q6ZU35 1233 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 GJD3Q8N144 294 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 OSBP2Q969R2 916 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 SNX27Q96L92 541 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.61□□□□□ -0.87
CSTF1-203ENST00000428552 SUGCTQ9HAC7 445 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 MKNK2Q9HBH9 465 aa9.61□□□□□ -0.87
CSTF1-203ENST00000428552 CTDP1Q9Y5B0 961 aaPredicted RBP9.61□□□□□ -0.87
CSTF1-203ENST00000428552 POTEB3A0JP26 581 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 MINDY4BA8MYZ0 360 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 PLA2G6O60733 806 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 BAIAP3O94812 1187 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 TTLL1O95922 423 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 MYL3P08590 195 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 FDX1P10109 184 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 ALAS1P13196 640 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 STAT2P52630 851 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 TKFCQ3LXA3 575 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 HSP90AB4PQ58FF6 505 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 POTEBQ6S5H4 581 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 FTSJ3Q8IY81 847 aaKnown RBP9.6□□□□□ -0.87
CSTF1-203ENST00000428552 STAG1Q8WVM7 1258 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 DHX38Q92620 1227 aaKnown RBP9.6□□□□□ -0.87
CSTF1-203ENST00000428552 CHMP4CQ96CF2 233 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 DDRGK1Q96HY6 314 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 GMCL1Q96IK5 515 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 FBXL18Q96ME1 805 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 MTG1Q9BT17 334 aaPredicted RBP9.6□□□□□ -0.87
CSTF1-203ENST00000428552 WDR11Q9BZH6 1224 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 POLR3EQ9NVU0 708 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 SIP14410 1827 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 TRIOO75962 3097 aa9.6□□□□□ -0.87
CSTF1-203ENST00000428552 LINC01553A4QN01 128 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 GRXCR2A6NFK2 248 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 A6NJR5 290 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 KIF28PB7ZC32 967 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 KCNA5P22460 613 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 ALDH5A1P51649 535 aaPredicted RBP9.59□□□□□ -0.87
CSTF1-203ENST00000428552 ERVK-21P61565 698 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 NFRKBQ6P4R8 1299 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 FAM160B2Q86V87 743 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 NEDD1Q8NHV4 660 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 NEK9Q8TD19 979 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 PANK1Q8TE04 598 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 COPS5Q92905 334 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 FTOQ9C0B1 505 aaKnown RBP eCLIP9.59□□□□□ -0.87
CSTF1-203ENST00000428552 RNF216Q9NWF9 866 aaPredicted RBP9.59□□□□□ -0.87
CSTF1-203ENST00000428552 MTUS1Q9ULD2 1270 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 PRR12Q9ULL5 1215 aa9.59□□□□□ -0.87
CSTF1-203ENST00000428552 NFIBO00712 420 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 NBNO60934 754 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 GJB5O95377 273 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 CXCL10P02778 98 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 MCCP23508 829 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 CPT1AP50416 773 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 PTPN11Q06124 597 aaPredicted RBP9.58□□□□□ -0.88
CSTF1-203ENST00000428552 MKRN4PQ13434 485 aaPredicted RBP9.58□□□□□ -0.88
CSTF1-203ENST00000428552 BAATQ14032 418 aaPredicted RBP9.58□□□□□ -0.88
CSTF1-203ENST00000428552 FAM47CQ5HY64 1035 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 PTCRAQ6ISU1 281 aaPredicted RBP9.58□□□□□ -0.88
CSTF1-203ENST00000428552 TRAF7Q6Q0C0 670 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 NSMFQ6X4W1 530 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 KCTD1Q719H9 257 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 OR6J1Q8NGC5 347 aa9.58□□□□□ -0.88
CSTF1-203ENST00000428552 CHURC1Q8WUH1 139 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms