RNA–Protein interactions for RNA: ENST00000428236.5

CXorf40A-206, Transcript of chromosome X open reading frame 40A, humanhuman

TSL 3 BASIC

Gene CXorf40A, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-206ENST00000428236 SMARCA1P28370 1054 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 KRT2P35908 639 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 CAP2P40123 477 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 RRP1BQ14684 758 aaKnown RBP12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 STK38Q15208 465 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 CCL14Q16627 93 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 TPRNQ4KMQ1 711 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 ASPRV1Q53RT3 343 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 ANO1Q5XXA6 986 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 FAM177A1Q8N128 213 aaPredicted RBP12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 PHF20Q9BVI0 1012 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 SPZ1Q9BXG8 430 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 DNAJC18Q9H819 358 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 AS3MTQ9HBK9 375 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 TXNRD2Q9NNW7 524 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 SH3GLB2Q9NR46 395 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 VPS54Q9P1Q0 977 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 CLIP2Q9UDT6 1046 aa12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 HERC5Q9UII4 1024 aaKnown RBP12.88□□□□□ -0.35
CXorf40A-206ENST00000428236 PRUNE2Q8WUY3 3088 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 hCG_1642624A0A1W2PR95 340 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 BTBD18B2RXH4 712 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 KLRF2D3W0D1 207 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 MAPK4P31152 587 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 HOXA7P31268 230 aaPredicted RBP12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 RGS2P41220 211 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 ATN1P54259 1190 aaPredicted RBP12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 HERVK_113P62684 666 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 SF3A1Q15459 793 aaKnown RBP12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 Q3C1V9 767 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 TMEM179Q6ZVK1 233 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 LINC00301Q8NCQ3 95 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 BICD2Q8TD16 824 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 USP6NLQ92738 828 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 PGBD1Q96JS3 809 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 FTOQ9C0B1 505 aaKnown RBP eCLIP12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 TMOD4Q9NZQ9 345 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 RBPJLQ9UBG7 517 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 PRKAG2Q9UGJ0 569 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 MTMR7Q9Y216 660 aa12.87□□□□□ -0.35
CXorf40A-206ENST00000428236 MYH4Q9Y623 1939 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 SPTLC2O15270 562 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 CALML3P27482 149 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 ME1P48163 572 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 MTMR2Q13614 643 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 SHHQ15465 462 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 ABCB5Q2M3G0 1257 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 RILPL1Q5EBL4 403 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 MORN1Q5T089 497 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 LRRC47Q8N1G4 583 aaKnown RBP12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 CCDC148Q8NFR7 591 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 MYLIPQ8WY64 445 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 WDR18Q9BV38 432 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 PORCNQ9H237 461 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 CLIC4Q9Y696 253 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 EYSQ5T1H1 3165 aa12.86□□□□□ -0.35
CXorf40A-206ENST00000428236 SYCE3A1L190 88 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 GOLGA8HP0CJ92 632 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 SNHG28P0DPA3 235 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 PDHBP11177 359 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 MRE11P49959 708 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 BACE1P56817 501 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 NLRP5P59047 1200 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 ATP2B2Q01814 1243 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 SLC39A14Q15043 492 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 LRSAM1Q6UWE0 723 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 CCDC73Q6ZRK6 1079 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 PLEKHH3Q7Z736 793 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 PIBF1Q8WXW3 757 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 MKL1Q969V6 931 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 RRP36Q96EU6 259 aaKnown RBP12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 CABP5Q9NP86 173 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 DDX19AQ9NUU7 478 aaKnown RBP12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 NYAP2Q9P242 653 aa12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 SEC63Q9UGP8 760 aaKnown RBP12.85□□□□□ -0.35
CXorf40A-206ENST00000428236 SPTBN5Q9NRC6 3674 aaKnown RBP12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 FRMPD3Q5JV73 1810 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 A0A1W2PQ27 194 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 A0A1W2PQ64 194 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 A0A1W2PQD8 194 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 CYTH3O43739 400 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 LIG1P18858 919 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 COL9A1P20849 921 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 RTP1P59025 263 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 ERVK-9P63128 1117 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 ERVK-24P63145 666 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 ICA1Q05084 483 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 NR5A1Q13285 461 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 C9orf50Q5SZB4 431 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 GPATCH4Q5T3I0 446 aaKnown RBP12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 GALNT17Q6IS24 598 aa12.84□□□□□ -0.35
CXorf40A-206ENST00000428236 CLEC10AQ8IUN9 316 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms