RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 PDGFCQ9NRA1 345 aa20.47■□□□□ 0.87
DDR1-235ENST00000428153 FOSL2P15408 326 aa20.46■□□□□ 0.87
DDR1-235ENST00000428153 DGKHQ86XP1 1220 aa20.46■□□□□ 0.87
DDR1-235ENST00000428153 DNERQ8NFT8 737 aa20.46■□□□□ 0.87
DDR1-235ENST00000428153 MTIF3Q9H2K0 278 aaKnown RBP20.46■□□□□ 0.87
DDR1-235ENST00000428153 HIPK3Q9H422 1215 aa20.46■□□□□ 0.87
DDR1-235ENST00000428153 IL23AQ9NPF7 189 aa20.46■□□□□ 0.87
DDR1-235ENST00000428153 SPTBN5Q9NRC6 3674 aaKnown RBP20.46■□□□□ 0.87
DDR1-235ENST00000428153 NFIBO00712 420 aa20.45■□□□□ 0.86
DDR1-235ENST00000428153 NKRFO15226 690 aaKnown RBP eCLIP20.45■□□□□ 0.86
DDR1-235ENST00000428153 SDSP20132 328 aa20.45■□□□□ 0.86
DDR1-235ENST00000428153 EEPD1Q7L9B9 569 aa20.45■□□□□ 0.86
DDR1-235ENST00000428153 RGS22Q8NE09 1264 aa20.45■□□□□ 0.86
DDR1-235ENST00000428153 CLEC4DQ8WXI8 215 aa20.45■□□□□ 0.86
DDR1-235ENST00000428153 RILPL2Q969X0 211 aa20.45■□□□□ 0.86
DDR1-235ENST00000428153 PPP1R12CQ9BZL4 782 aa20.45■□□□□ 0.86
DDR1-235ENST00000428153 GPCPD1Q9NPB8 672 aa20.45■□□□□ 0.86
DDR1-235ENST00000428153 POLR3EQ9NVU0 708 aa20.45■□□□□ 0.86
DDR1-235ENST00000428153 GRIN2DO15399 1336 aa20.45■□□□□ 0.86
DDR1-235ENST00000428153 FRMPD2Q68DX3 1309 aaPredicted RBP20.45■□□□□ 0.86
DDR1-235ENST00000428153 PTPDC1A2A3K4 754 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 B4DLN1 442 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 HIP1O00291 1037 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 EDNRBP24530 442 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 CPT1AP50416 773 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 MRPL12P52815 198 aaKnown RBP20.44■□□□□ 0.86
DDR1-235ENST00000428153 HAND2P61296 217 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 RNF207Q6ZRF8 634 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 CHD1LQ86WJ1 897 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 HERVK_113Q902F9 699 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 TIFAQ96CG3 184 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 COL25A1Q9BXS0 654 aaPredicted RBP20.44■□□□□ 0.86
DDR1-235ENST00000428153 WDR11Q9BZH6 1224 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 ZNF576Q9H609 170 aa20.44■□□□□ 0.86
DDR1-235ENST00000428153 TTC28Q96AY4 2481 aa20.43■□□□□ 0.86
DDR1-235ENST00000428153 ZNF213O14771 459 aa20.43■□□□□ 0.86
DDR1-235ENST00000428153 SUPT20HL2P0C7V6 817 aa20.43■□□□□ 0.86
DDR1-235ENST00000428153 RPS6P62753 249 aaKnown RBP20.43■□□□□ 0.86
DDR1-235ENST00000428153 BRDTQ58F21 947 aaPredicted RBP20.43■□□□□ 0.86
DDR1-235ENST00000428153 ZNF365Q70YC5 407 aa20.43■□□□□ 0.86
DDR1-235ENST00000428153 IQCA1Q86XH1 822 aa20.43■□□□□ 0.86
DDR1-235ENST00000428153 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
DDR1-235ENST00000428153 PLEKHM2Q8IWE5 1019 aa20.43■□□□□ 0.86
DDR1-235ENST00000428153 PURBQ96QR8 312 aaKnown RBP20.43■□□□□ 0.86
DDR1-235ENST00000428153 CYP2C18P33260 490 aa20.42■□□□□ 0.86
DDR1-235ENST00000428153 NUCB1Q02818 461 aa20.42■□□□□ 0.86
DDR1-235ENST00000428153 GRIN2CQ14957 1233 aa20.42■□□□□ 0.86
DDR1-235ENST00000428153 SLC30A10Q6XR72 485 aa20.42■□□□□ 0.86
DDR1-235ENST00000428153 RPUSD2Q8IZ73 545 aaKnown RBP20.42■□□□□ 0.86
DDR1-235ENST00000428153 ANKS1AQ92625 1134 aa20.42■□□□□ 0.86
DDR1-235ENST00000428153 NOC4LQ9BVI4 516 aaKnown RBP20.42■□□□□ 0.86
DDR1-235ENST00000428153 PBX4Q9BYU1 374 aa20.42■□□□□ 0.86
DDR1-235ENST00000428153 DDX49Q9Y6V7 483 aaKnown RBP20.42■□□□□ 0.86
DDR1-235ENST00000428153 RAD50Q92878 1312 aa20.42■□□□□ 0.86
DDR1-235ENST00000428153 LAMA4Q16363 1823 aa20.41■□□□□ 0.86
DDR1-235ENST00000428153 B4GALT4O60513 344 aa20.41■□□□□ 0.86
DDR1-235ENST00000428153 KPNA6O60684 536 aa20.41■□□□□ 0.86
DDR1-235ENST00000428153 FGBP02675 491 aa20.41■□□□□ 0.86
DDR1-235ENST00000428153 PURAQ00577 322 aaKnown RBP20.41■□□□□ 0.86
DDR1-235ENST00000428153 RAB30Q15771 203 aa20.41■□□□□ 0.86
DDR1-235ENST00000428153 SCFD2Q8WU76 684 aa20.41■□□□□ 0.86
DDR1-235ENST00000428153 DSCC1Q9BVC3 393 aa20.41■□□□□ 0.86
DDR1-235ENST00000428153 ALDH8A1Q9H2A2 487 aaPredicted RBP20.41■□□□□ 0.86
DDR1-235ENST00000428153 PFKMP08237 780 aa20.4■□□□□ 0.86
DDR1-235ENST00000428153 CALML3P27482 149 aa20.4■□□□□ 0.86
DDR1-235ENST00000428153 NEDD4P46934 1319 aa20.4■□□□□ 0.86
DDR1-235ENST00000428153 PDE4DQ08499 809 aa20.4■□□□□ 0.86
DDR1-235ENST00000428153 PPP2R5BQ15173 497 aa20.4■□□□□ 0.86
DDR1-235ENST00000428153 TMEM63BQ5T3F8 832 aa20.4■□□□□ 0.86
DDR1-235ENST00000428153 DIAPH3Q9NSV4 1193 aa20.4■□□□□ 0.86
DDR1-235ENST00000428153 CHD7Q9P2D1 2997 aa20.4■□□□□ 0.86
DDR1-235ENST00000428153 SCN10AQ9Y5Y9 1956 aa20.39■□□□□ 0.86
DDR1-235ENST00000428153 A6NJR5 290 aa20.39■□□□□ 0.85
DDR1-235ENST00000428153 ACRP10323 421 aa20.39■□□□□ 0.85
DDR1-235ENST00000428153 PNMA1Q8ND90 353 aa20.39■□□□□ 0.85
DDR1-235ENST00000428153 MTG1Q9BT17 334 aaPredicted RBP20.39■□□□□ 0.85
DDR1-235ENST00000428153 TRPV6Q9H1D0 765 aa20.39■□□□□ 0.85
DDR1-235ENST00000428153 GPHNQ9NQX3 736 aaPredicted RBP20.39■□□□□ 0.85
DDR1-235ENST00000428153 MSRAQ9UJ68 235 aa20.39■□□□□ 0.85
DDR1-235ENST00000428153 PTGS1P23219 599 aa20.38■□□□□ 0.85
DDR1-235ENST00000428153 PSMC6P62333 389 aa20.38■□□□□ 0.85
DDR1-235ENST00000428153 PTPN11Q06124 597 aaPredicted RBP20.38■□□□□ 0.85
DDR1-235ENST00000428153 ASPRV1Q53RT3 343 aa20.38■□□□□ 0.85
DDR1-235ENST00000428153 B4GALNT3Q6L9W6 998 aa20.38■□□□□ 0.85
DDR1-235ENST00000428153 CWC27Q6UX04 472 aaKnown RBP20.38■□□□□ 0.85
DDR1-235ENST00000428153 OR6J1Q8NGC5 347 aa20.38■□□□□ 0.85
DDR1-235ENST00000428153 WNT8AQ9H1J5 351 aa20.38■□□□□ 0.85
DDR1-235ENST00000428153 KAT14Q9H8E8 782 aa20.38■□□□□ 0.85
DDR1-235ENST00000428153 CTNNA3Q9UI47 895 aa20.38■□□□□ 0.85
DDR1-235ENST00000428153 MYO9BQ13459 2157 aa20.38■□□□□ 0.85
DDR1-235ENST00000428153 TNKSO95271 1327 aa20.37■□□□□ 0.85
DDR1-235ENST00000428153 ABCB11O95342 1321 aa20.37■□□□□ 0.85
DDR1-235ENST00000428153 UMODL1Q5DID0 1318 aa20.37■□□□□ 0.85
DDR1-235ENST00000428153 KDM4AO75164 1064 aa20.37■□□□□ 0.85
DDR1-235ENST00000428153 TTLL4Q14679 1199 aa20.37■□□□□ 0.85
DDR1-235ENST00000428153 IMMTQ16891 758 aaKnown RBP20.37■□□□□ 0.85
DDR1-235ENST00000428153 NFRKBQ6P4R8 1299 aa20.37■□□□□ 0.85
DDR1-235ENST00000428153 SYMPKQ92797 1274 aaKnown RBP20.37■□□□□ 0.85
DDR1-235ENST00000428153 ZSCAN10Q96SZ4 725 aaPredicted RBP20.37■□□□□ 0.85
DDR1-235ENST00000428153 GAS2L1Q99501 681 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms