RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 ZNF532Q9HCE3 1301 aa14.34□□□□□ -0.11
DDX39B-208ENST00000428098 USP17L12C9JPN9 530 aa14.33□□□□□ -0.12
DDX39B-208ENST00000428098 USP17L21D6R901 530 aa14.33□□□□□ -0.12
DDX39B-208ENST00000428098 SURF6O75683 361 aaKnown RBP14.33□□□□□ -0.12
DDX39B-208ENST00000428098 BCAR3O75815 825 aa14.33□□□□□ -0.12
DDX39B-208ENST00000428098 OS9Q13438 667 aaPredicted RBP14.33□□□□□ -0.12
DDX39B-208ENST00000428098 DUSP28Q4G0W2 176 aa14.33□□□□□ -0.12
DDX39B-208ENST00000428098 EP400NLQ6ZTU2 488 aa14.33□□□□□ -0.12
DDX39B-208ENST00000428098 KIAA1211Q6ZU35 1233 aa14.33□□□□□ -0.12
DDX39B-208ENST00000428098 FBXO22Q8NEZ5 403 aa14.33□□□□□ -0.12
DDX39B-208ENST00000428098 POLR3EQ9NVU0 708 aa14.33□□□□□ -0.12
DDX39B-208ENST00000428098 TNNQ9UQP3 1299 aa14.33□□□□□ -0.12
DDX39B-208ENST00000428098 TMEM221A6NGB7 291 aa14.32□□□□□ -0.12
DDX39B-208ENST00000428098 M0R296 226 aa14.32□□□□□ -0.12
DDX39B-208ENST00000428098 NBNO60934 754 aa14.32□□□□□ -0.12
DDX39B-208ENST00000428098 TRIM67Q6ZTA4 783 aa14.32□□□□□ -0.12
DDX39B-208ENST00000428098 BANK1Q8NDB2 785 aa14.32□□□□□ -0.12
DDX39B-208ENST00000428098 SSH3Q8TE77 659 aa14.32□□□□□ -0.12
DDX39B-208ENST00000428098 MTG1Q9BT17 334 aaPredicted RBP14.32□□□□□ -0.12
DDX39B-208ENST00000428098 CTDP1Q9Y5B0 961 aaPredicted RBP14.32□□□□□ -0.12
DDX39B-208ENST00000428098 FAM186AA6NE01 2351 aa14.32□□□□□ -0.12
DDX39B-208ENST00000428098 MYH8P13535 1937 aa14.31□□□□□ -0.12
DDX39B-208ENST00000428098 OAZ1P54368 228 aa14.31□□□□□ -0.12
DDX39B-208ENST00000428098 ATP8B2P98198 1209 aa14.31□□□□□ -0.12
DDX39B-208ENST00000428098 DLX2Q07687 328 aaPredicted RBP14.31□□□□□ -0.12
DDX39B-208ENST00000428098 BFSP2Q13515 415 aa14.31□□□□□ -0.12
DDX39B-208ENST00000428098 SMAD2Q15796 467 aaKnown RBP14.31□□□□□ -0.12
DDX39B-208ENST00000428098 NFRKBQ6P4R8 1299 aa14.31□□□□□ -0.12
DDX39B-208ENST00000428098 ACAD9Q9H845 621 aa14.31□□□□□ -0.12
DDX39B-208ENST00000428098 NYAP2Q9P242 653 aa14.31□□□□□ -0.12
DDX39B-208ENST00000428098 SIP14410 1827 aa14.31□□□□□ -0.12
DDX39B-208ENST00000428098 DMDP11532 3685 aa14.31□□□□□ -0.12
DDX39B-208ENST00000428098 SCN10AQ9Y5Y9 1956 aa14.31□□□□□ -0.12
DDX39B-208ENST00000428098 CXCL10P02778 98 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 CLUL1Q15846 466 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.3□□□□□ -0.12
DDX39B-208ENST00000428098 ASCL5Q7RTU5 278 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 MORC4Q8TE76 937 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 DHX38Q92620 1227 aaKnown RBP14.3□□□□□ -0.12
DDX39B-208ENST00000428098 PRRX2Q99811 253 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 WDR11Q9BZH6 1224 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 ATP8A2Q9NTI2 1148 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 RNF146Q9NTX7 359 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 CLDND1Q9NY35 253 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 FEM1BQ9UK73 627 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 FAM50BQ9Y247 325 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 COG6Q9Y2V7 657 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 NOP58Q9Y2X3 529 aaKnown RBP14.3□□□□□ -0.12
DDX39B-208ENST00000428098 BAZ2AQ9UIF9 1905 aaKnown RBP14.3□□□□□ -0.12
DDX39B-208ENST00000428098 CACNA1BQ00975 2339 aa14.3□□□□□ -0.12
DDX39B-208ENST00000428098 MBTPS2O43462 519 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 CHGBP05060 677 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 VCPP55072 806 aaKnown RBP14.29□□□□□ -0.12
DDX39B-208ENST00000428098 CTC1Q2NKJ3 1217 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 LRRFIP1Q32MZ4 808 aaKnown RBP14.29□□□□□ -0.12
DDX39B-208ENST00000428098 EPC2Q52LR7 807 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 CNKSR3Q6P9H4 555 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 CTR9Q6PD62 1173 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 TRMT2AQ8IZ69 625 aaKnown RBP14.29□□□□□ -0.12
DDX39B-208ENST00000428098 FBXL6Q8N531 539 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 ARHGAP45Q92619 1136 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 ATOH1Q92858 354 aaPredicted RBP14.29□□□□□ -0.12
DDX39B-208ENST00000428098 VTA1Q9NP79 307 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 GPHNQ9NQX3 736 aaPredicted RBP14.29□□□□□ -0.12
DDX39B-208ENST00000428098 CLIP2Q9UDT6 1046 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 CTNNA3Q9UI47 895 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 TANC1Q9C0D5 1861 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 EPG5Q9HCE0 2579 aa14.29□□□□□ -0.12
DDX39B-208ENST00000428098 ABHD14A-ACY1A0A1B0GW23 586 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 RBM47A0AV96 593 aaKnown RBP14.28□□□□□ -0.12
DDX39B-208ENST00000428098 H3BNC9 293 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 MBD4O95243 580 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 RASA1P20936 1047 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 PTPN11Q06124 597 aaPredicted RBP14.28□□□□□ -0.12
DDX39B-208ENST00000428098 PTGISQ16647 500 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 PTPROQ16827 1216 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 MUM1L1Q5H9M0 696 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 ERMP1Q7Z2K6 904 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 TRERF1Q96PN7 1200 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 CRBNQ96SW2 442 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 CYP39A1Q9NYL5 469 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 INSL6Q9Y581 213 aa14.28□□□□□ -0.12
DDX39B-208ENST00000428098 PLXNA3P51805 1871 aa14.27□□□□□ -0.12
DDX39B-208ENST00000428098 A6NJR5 290 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 RGS20O76081 388 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 SELPP16109 830 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 CPT1AP50416 773 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 SNAP25P60880 206 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 HTRA4P83105 476 aaPredicted RBP14.27□□□□□ -0.13
DDX39B-208ENST00000428098 ZXDAP98168 799 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 GPM6BQ13491 265 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 PKN1Q16512 942 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 TIGD5Q53EQ6 642 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 GDF6Q6KF10 455 aaPredicted RBP14.27□□□□□ -0.13
DDX39B-208ENST00000428098 LRRC8DQ7L1W4 858 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 RPAINQ86UA6 219 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 STK11IPQ8N1F8 1099 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 OR6J1Q8NGC5 347 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 SP7Q8TDD2 431 aaPredicted RBP14.27□□□□□ -0.13
DDX39B-208ENST00000428098 AFAP1L1Q8TED9 768 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms