RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 GSTA1P08263 222 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 GSTA2P09210 222 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 EPHB1P54762 984 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 RINT1Q6NUQ1 792 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 PDXDC2PQ6P474 469 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 MLKLQ8NB16 471 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 FANCBQ8NB91 859 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 OTUD5Q96G74 571 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 PRIMPOLQ96LW4 560 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 SEC31BQ9NQW1 1179 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 FAM8A1Q9UBU6 413 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 KIF24Q5T7B8 1368 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 PLEKHG1Q9ULL1 1385 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 I3L4J1 428 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 TUBB4BP68371 445 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 GOLGA8FQ08AF8 430 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 GOLGA8DPQ0D2H9 430 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 ADALQ6DHV7 355 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 INTS8Q75QN2 995 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 SIX6OS1Q8N1H7 587 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 LSM14BQ9BX40 385 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 TAB2Q9NYJ8 693 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 UBN2Q6ZU65 1347 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 ARAP3Q8WWN8 1544 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 FAM170AA1A519 330 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 CEP104O60308 925 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 SRGAP2BP0DMP2 458 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 ZNF18P17022 549 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 LMNB1P20700 586 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 ZNF157P51786 506 aaPredicted RBP10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 FOXP4Q8IVH2 680 aaPredicted RBP10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 MAP7D3Q8IWC1 876 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 THEM5Q8N1Q8 247 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 VPS37BQ9H9H4 285 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 ANGPTL3Q9Y5C1 460 aa10.89□□□□□ -0.67
CLTCL1-202ENST00000427926 TFAMQ00059 246 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 PSMD6Q15008 389 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 ARMCX2Q7L311 632 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 NDUFAF2Q8N183 169 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 U2AF1L4Q8WU68 220 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 STAMQ92783 540 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 ARMCX3Q9UH62 379 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 UGGT1Q9NYU2 1555 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 SASH1O94885 1247 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 ABCD1P33897 745 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 PEX26Q7Z412 305 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 EFCAB13Q8IY85 973 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 TTC30BQ8N4P2 665 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 SECISBP2LQ93073 1101 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 GJD4Q96KN9 370 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 SLC16A2P36021 539 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 MAGEA1P43355 309 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 RBBP5Q15291 538 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 FEZ2Q9UHY8 353 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 SAMD9LQ8IVG5 1584 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 PNMA6EA0A0J9YXQ4 647 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 ECE2O60344 883 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 CIITAP33076 1130 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 C8orf74Q6P047 294 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 CEP57Q86XR8 500 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 IFT122Q9HBG6 1241 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 SLC38A10Q9HBR0 1119 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 PPME1Q9Y570 386 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 NLRP1Q9C000 1473 aa10.88□□□□□ -0.67
CLTCL1-202ENST00000427926 TBC1D8O95759 1140 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 RHOXF2BP0C7M4 288 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 NSFP46459 744 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 GBP6Q6ZN66 633 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 RNF207Q6ZRF8 634 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 MICALL1Q8N3F8 863 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 RHOXF2Q9BQY4 288 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 NLRC4Q9NPP4 1024 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 PCDHB4Q9Y5E5 795 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 ERVV-1B6SEH8 477 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 GTF2F1P35269 517 aaKnown RBP eCLIP10.87□□□□□ -0.673e-8■■■■■ 161.7
CLTCL1-202ENST00000427926 TAF1CQ15572 869 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 HHATQ5VTY9 493 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 NUDT18Q6ZVK8 323 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 NLRP4Q96MN2 994 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 FAM207AQ9NSI2 230 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 OSTNP61366 133 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 TMTC4Q5T4D3 741 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 BRINP3Q76B58 766 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 ARHGEF25Q86VW2 580 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 EXOC4Q96A65 974 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 NEMP1O14524 444 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 KRT15P19012 456 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 EIF2AK2P19525 551 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 ABCB4P21439 1286 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 PSMD2Q13200 908 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 MYLK4Q86YV6 388 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 SCYL1Q96KG9 808 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 PRDM10Q9NQV6 1147 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 HECW2Q9P2P5 1572 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 HACL1Q9UJ83 578 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 SNX14Q9Y5W7 946 aa10.87□□□□□ -0.67
CLTCL1-202ENST00000427926 ADRA2BP18089 450 aa10.86□□□□□ -0.67
CLTCL1-202ENST00000427926 PTK2Q05397 1052 aa10.86□□□□□ -0.67
CLTCL1-202ENST00000427926 RRAGAQ7L523 313 aa10.86□□□□□ -0.67
CLTCL1-202ENST00000427926 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms