RNA–Protein interactions for RNA: ENST00000427658.1

AFG3L1P-208, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, human

TSL 2

Gene AFG3L1P, Length 2,758 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFG3L1P-208	ENST00000427658	PLCD1	P51178	756 aa		11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	VAV2	P52735	878 aa		11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	EXOSC10	Q01780	885 aa	Known RBP	11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	KIF23	Q02241	960 aa	Predicted RBP	11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TMEM62	Q0P6H9	643 aa		11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CDC37	Q16543	378 aa	Predicted RBP	11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TRIM68	Q6AZZ1	485 aa		11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GRAMD1C	Q8IYS0	662 aa		11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	LACRT	Q9GZZ8	138 aa		11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	NFU1	Q9UMS0	254 aa		11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SLC12A4	Q9UP95	1085 aa		11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	DUSP10	Q9Y6W6	482 aa		11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	NHS	Q6T4R5	1651 aa		11.58	□□□□□ -0.56
AFG3L1P-208	ENST00000427658		F8W031	263 aa	Predicted RBP	11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PPP6R2	O75170	966 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ATP6V1G1	O75348	118 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	NPTXR	O95502	500 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CCT6A	P40227	531 aa	Known RBP	11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TEF	Q10587	303 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PAK2	Q13177	524 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	MYBPC3	Q14896	1274 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PTPA	Q15257	358 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TAF11	Q15544	211 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	NT5DC1	Q5TFE4	455 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ANO7	Q6IWH7	933 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	KLHL10	Q6JEL2	608 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TEX9	Q8N6V9	391 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CNBD1	Q8NA66	436 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	EAF2	Q96CJ1	260 aa	Predicted RBP	11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	BICD1	Q96G01	975 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SYT15	Q9BQS2	421 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	AGXT2	Q9BYV1	514 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SEC31B	Q9NQW1	1179 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SMARCAL1	Q9NZC9	954 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ANKIB1	Q9P2G1	1089 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ZNF831	Q5JPB2	1677 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	BRWD3	Q6RI45	1802 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	RCCD1	A6NED2	376 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	HMGB1	P09429	215 aa	Known RBP	11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ERCC5	P28715	1186 aa	Predicted RBP	11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ALDH3A1	P30838	453 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GUCY2F	P51841	1108 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SPATA1	Q5VX52	437 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ZNF772	Q68DY9	489 aa	Predicted RBP	11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	NOC3L	Q8WTT2	800 aa	Known RBP	11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ZNF274	Q96GC6	653 aa	Predicted RBP	11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CTAGE1	Q96RT6	745 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TLR7	Q9NYK1	1049 aa	Known RBP	11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	BCL9	O00512	1426 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ITIH6	Q6UXX5	1313 aa		11.57	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GOLGA6L10	A6NI86	522 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ONECUT3	O60422	494 aa	Predicted RBP	11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	HOXB7	P09629	217 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GNAQ	P50148	359 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	POLE2	P56282	527 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	KCNJ2	P63252	427 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.56	□□□□□ -0.56	5e-6	■■■■■ 30.9
AFG3L1P-208	ENST00000427658	ADAM9	Q13443	819 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	IFT81	Q8WYA0	676 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PHAX	Q9H814	394 aa	Known RBP	11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TMBIM4	Q9HC24	238 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GOLGB1	Q14789	3259 aa	Known RBP	11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ESYT3	A0FGR9	886 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ANO9	A1A5B4	782 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CFAP73	A6NFT4	308 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GSTA1	P08263	222 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	DRD4	P21917	467 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TNFRSF8	P28908	595 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	EIF4A1	P60842	406 aa	Known RBP	11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CDKAL1	Q5VV42	579 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ARMC9	Q7Z3E5	817 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TRPC5	Q9UL62	973 aa	Predicted RBP	11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	MYH8	P13535	1937 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	RBM47	A0AV96	593 aa	Known RBP	11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	BTBD11	A6QL63	1104 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	KRT86	O43790	486 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GLI1	P08151	1106 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CCNG1	P51959	295 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ITIH3	Q06033	890 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	FAM133B	Q5BKY9	247 aa	Known RBP	11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	KCNV2	Q8TDN2	545 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	OCEL1	Q9H607	264 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	EHD2	Q9NZN4	543 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CNOT8	Q9UFF9	292 aa	Known RBP	11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SNX12	Q9UMY4	172 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CEP131	Q9UPN4	1083 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	AGAP1	Q9UPQ3	857 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PLAA	Q9Y263	795 aa		11.56	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SH3TC1	Q8TE82	1336 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658		A8MUI8	341 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ATP2A2	P16615	1042 aa	Known RBP	11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ALDH5A1	P51649	535 aa	Predicted RBP	11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CCDC38	Q502W7	563 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CHADL	Q6NUI6	762 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GJD4	Q96KN9	370 aa	Predicted RBP	11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PHACTR1	Q9C0D0	580 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	RGS17	Q9UGC6	210 aa	Predicted RBP	11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms