RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 KCNJ12Q14500 433 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 PPP2R5BQ15173 497 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 FAM160B1Q5W0V3 765 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 EAF2Q96CJ1 260 aaPredicted RBP14.43□□□□□ -0.1
SPG11-202ENST00000427534 TMEM94Q12767 1356 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 DDIT3P35638 169 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 MYSM1Q5VVJ2 828 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 GDAP1Q8TB36 358 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 NEO1Q92859 1461 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 ODR4Q5SWX8 454 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 CERS3Q8IU89 383 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 MARCH10Q8NA82 808 aaPredicted RBP14.43□□□□□ -0.1
SPG11-202ENST00000427534 CCNYQ8ND76 341 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 ATP8A2Q9NTI2 1148 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 HSPD1P10809 573 aaKnown RBP14.43□□□□□ -0.1
SPG11-202ENST00000427534 RPS6KA1Q15418 735 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 IFIH1Q9BYX4 1025 aaKnown RBP14.43□□□□□ -0.1
SPG11-202ENST00000427534 MAP3K15Q6ZN16 1313 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 NBPF11Q86T75 865 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 MYOCDQ8IZQ8 938 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 SYMPKQ92797 1274 aaKnown RBP14.43□□□□□ -0.1
SPG11-202ENST00000427534 HESX1Q9UBX0 185 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.43□□□□□ -0.1
SPG11-202ENST00000427534 CDO1Q16878 200 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 RAPH1Q70E73 1250 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 GOLGA8CPA6NN73 597 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 ECE1P42892 770 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 TUBB4BP68371 445 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 NEDD9Q14511 834 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 NLGN1Q8N2Q7 840 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 RNF181Q9P0P0 153 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 WDR46O15213 610 aaKnown RBP14.42□□□□□ -0.1
SPG11-202ENST00000427534 PFKFB1P16118 471 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 MCF2L2Q86YR7 1114 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 PLEKHF1Q96S99 279 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 CPVLQ9H3G5 476 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 LMBRD1Q9NUN5 540 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 RABGAP1Q9Y3P9 1069 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 ACTN4O43707 911 aaKnown RBP14.42□□□□□ -0.1
SPG11-202ENST00000427534 ELF2Q15723 593 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 SNX25Q9H3E2 840 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 NRBP2Q9NSY0 501 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 YEATS2Q9ULM3 1422 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 SARNPP82979 210 aaKnown RBP14.42□□□□□ -0.1
SPG11-202ENST00000427534 HAUS1Q96CS2 278 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 HDAC11Q96DB2 347 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 BRD3Q15059 726 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 KRBA2Q6ZNG9 492 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 NEK8Q86SG6 692 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 FANCBQ8NB91 859 aa14.42□□□□□ -0.1
SPG11-202ENST00000427534 ZNF445P59923 1031 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 TRIM56Q9BRZ2 755 aaKnown RBP14.41□□□□□ -0.1
SPG11-202ENST00000427534 EFCC1Q9HA90 598 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 FAM8A1Q9UBU6 413 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 XDHP47989 1333 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 MAGI2Q86UL8 1455 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 ADAM9Q13443 819 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 SEPT6Q14141 434 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 MLKLQ8NB16 471 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 TPCN1Q9ULQ1 816 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 ARHGEF5Q12774 1597 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 BRD1O95696 1058 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 CTTNQ14247 550 aaKnown RBP14.41□□□□□ -0.1
SPG11-202ENST00000427534 LCORLQ8N3X6 602 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 CEP170P1Q96L14 293 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 ZNF75DP51815 510 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 PTGDRQ13258 359 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 MESDQ14696 234 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 I3L4J1 428 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 TRIM14Q14142 442 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 EXT2Q93063 718 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 GLT8D2Q9H1C3 349 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 KMT5AQ9NQR1 393 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 OR52Z1P0C646 297 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 TRIP13Q15645 432 aaPredicted RBP14.41□□□□□ -0.1
SPG11-202ENST00000427534 HP1BP3Q5SSJ5 553 aaPredicted RBP14.41□□□□□ -0.1
SPG11-202ENST00000427534 DENND2CQ68D51 928 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 SYNE4Q8N205 404 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 LZTS2Q9BRK4 669 aa14.41□□□□□ -0.1
SPG11-202ENST00000427534 SOS2Q07890 1332 aaPredicted RBP14.4□□□□□ -0.1
SPG11-202ENST00000427534 A6NJR5 290 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 SGK1O00141 431 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 SCG2P13521 617 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 CCDC13Q8IYE1 715 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 SYNDIG1Q9H7V2 258 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 CCND2P30279 289 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 MYL7Q01449 175 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 RBBP5Q15291 538 aaKnown RBP14.4□□□□□ -0.1
SPG11-202ENST00000427534 ADALQ6DHV7 355 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 MIS18BP1Q6P0N0 1132 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 DACT3Q96B18 629 aaPredicted RBP14.4□□□□□ -0.1
SPG11-202ENST00000427534 KRT33BQ14525 404 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 G3BP2Q9UN86 482 aaKnown RBP14.4□□□□□ -0.1
SPG11-202ENST00000427534 SSH2Q76I76 1423 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 STAT1P42224 750 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 ZNF394Q53GI3 561 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 HDXQ7Z353 690 aa14.4□□□□□ -0.1
SPG11-202ENST00000427534 MCUR1Q96AQ8 359 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms