RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 PTPRSQ13332 1948 aa18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 LOC102724159A0A0B4J2E5 919 aa18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 ASB14A6NK59 587 aa18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 TLE2Q04725 743 aa18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 PWP2Q15269 919 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 LRIT3Q3SXY7 679 aa18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 CCDC178Q5BJE1 867 aa18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 BMP2KLQ5H9B9 411 aa18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 CENPQQ7L2Z9 268 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 TDHQ8IZJ6 230 aa18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 IGDCC4Q8TDY8 1250 aa18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 RUFY2Q8WXA3 655 aa18.69■□□□□ 0.58
HLA-DQB2-230ENST00000427449 MOXD2PA6NHM9 499 aa18.68■□□□□ 0.58
HLA-DQB2-230ENST00000427449 ASGR1P07306 291 aa18.68■□□□□ 0.58
HLA-DQB2-230ENST00000427449 FAAP100Q0VG06 881 aa18.68■□□□□ 0.58
HLA-DQB2-230ENST00000427449 GRM4Q14833 912 aa18.68■□□□□ 0.58
HLA-DQB2-230ENST00000427449 NECTIN1Q15223 517 aa18.68■□□□□ 0.58
HLA-DQB2-230ENST00000427449 SLC43A3Q8NBI5 491 aa18.68■□□□□ 0.58
HLA-DQB2-230ENST00000427449 RGS22Q8NE09 1264 aa18.68■□□□□ 0.58
HLA-DQB2-230ENST00000427449 VTA1Q9NP79 307 aa18.68■□□□□ 0.58
HLA-DQB2-230ENST00000427449 TBX21Q9UL17 535 aa18.68■□□□□ 0.58
HLA-DQB2-230ENST00000427449 KIAA0355O15063 1070 aa18.67■□□□□ 0.58
HLA-DQB2-230ENST00000427449 EPHB4P54760 987 aa18.67■□□□□ 0.58
HLA-DQB2-230ENST00000427449 BEX3Q00994 111 aa18.67■□□□□ 0.58
HLA-DQB2-230ENST00000427449 USH1GQ495M9 461 aa18.67■□□□□ 0.58
HLA-DQB2-230ENST00000427449 IFIT1BQ5T764 474 aaKnown RBP18.67■□□□□ 0.58
HLA-DQB2-230ENST00000427449 EEPD1Q7L9B9 569 aa18.67■□□□□ 0.58
HLA-DQB2-230ENST00000427449 CHST3Q7LGC8 479 aa18.67■□□□□ 0.58
HLA-DQB2-230ENST00000427449 TLK2Q86UE8 772 aa18.67■□□□□ 0.58
HLA-DQB2-230ENST00000427449 ARIH2O95376 493 aa18.66■□□□□ 0.58
HLA-DQB2-230ENST00000427449 MYCNP04198 464 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB2-230ENST00000427449 PARP1P09874 1014 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB2-230ENST00000427449 C6orf222P0C671 652 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB2-230ENST00000427449 TNFAIP2Q03169 654 aa18.66■□□□□ 0.58
HLA-DQB2-230ENST00000427449 RNF207Q6ZRF8 634 aa18.66■□□□□ 0.58
HLA-DQB2-230ENST00000427449 UBAC1Q9BSL1 405 aa18.66■□□□□ 0.58
HLA-DQB2-230ENST00000427449 RIOX1Q9H6W3 641 aa18.66■□□□□ 0.58
HLA-DQB2-230ENST00000427449 LY9Q9HBG7 655 aa18.66■□□□□ 0.58
HLA-DQB2-230ENST00000427449 ELP1O95163 1332 aa18.66■□□□□ 0.58
HLA-DQB2-230ENST00000427449 PTPDC1A2A3K4 754 aa18.65■□□□□ 0.58
HLA-DQB2-230ENST00000427449 SLC27A2O14975 620 aa18.65■□□□□ 0.58
HLA-DQB2-230ENST00000427449 DUSP28Q4G0W2 176 aa18.65■□□□□ 0.58
HLA-DQB2-230ENST00000427449 C9orf50Q5SZB4 431 aa18.65■□□□□ 0.58
HLA-DQB2-230ENST00000427449 FAM126BQ8IXS8 530 aa18.65■□□□□ 0.58
HLA-DQB2-230ENST00000427449 SYTL5Q8TDW5 730 aaPredicted RBP18.65■□□□□ 0.58
HLA-DQB2-230ENST00000427449 TOX2Q96NM4 488 aa18.65■□□□□ 0.58
HLA-DQB2-230ENST00000427449 UBE2OQ9C0C9 1292 aaKnown RBP18.65■□□□□ 0.58
HLA-DQB2-230ENST00000427449 ABCB11O95342 1321 aa18.65■□□□□ 0.58
HLA-DQB2-230ENST00000427449 CHD7Q9P2D1 2997 aa18.65■□□□□ 0.58
HLA-DQB2-230ENST00000427449 KLRF2D3W0D1 207 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 CD4P01730 458 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 CLTBP09497 229 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 CALML3P27482 149 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 HSD17B4P51659 736 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 DNERQ8NFT8 737 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 NCOA7Q8NI08 942 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 BADQ92934 168 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 VWCEQ96DN2 955 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 MAF1Q9H063 256 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 STARD7Q9NQZ5 370 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 PNMA2Q9UL42 364 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 Q9Y3F1 56 aa18.64■□□□□ 0.57
HLA-DQB2-230ENST00000427449 IQSEC1Q6DN90 963 aa18.63■□□□□ 0.57
HLA-DQB2-230ENST00000427449 CCDC62Q6P9F0 684 aa18.63■□□□□ 0.57
HLA-DQB2-230ENST00000427449 TAAR1Q96RJ0 339 aa18.63■□□□□ 0.57
HLA-DQB2-230ENST00000427449 TRIP12Q14669 1992 aaPredicted RBP18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 PRUNE2Q8WUY3 3088 aa18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 REV3LO60673 3130 aa18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 SH2B2O14492 632 aaPredicted RBP18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 PQBP1O60828 265 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 FSCN1Q16658 493 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 GNASQ5JWF2 1037 aa18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 CREB3L3Q68CJ9 461 aa18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 CXCL17Q6UXB2 119 aa18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 COPS5Q92905 334 aa18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 ADD3Q9UEY8 706 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 FRMPD4Q14CM0 1322 aa18.62■□□□□ 0.57
HLA-DQB2-230ENST00000427449 UNC80Q8N2C7 3258 aa18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 SIP14410 1827 aa18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 ARVCFO00192 962 aa18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 IFIT3O14879 490 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 ZBTB5O15062 677 aa18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 RGS20O76081 388 aa18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 SHHQ15465 462 aa18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 FBXO11Q86XK2 927 aa18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 PCSK9Q8NBP7 692 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 NUP133Q8WUM0 1156 aa18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 MYL10Q9BUA6 226 aa18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 PRDM5Q9NQX1 630 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB2-230ENST00000427449 A0A0U1RQG5 324 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB2-230ENST00000427449 WTAPQ15007 396 aa18.6■□□□□ 0.57
HLA-DQB2-230ENST00000427449 GPR153Q6NV75 609 aa18.6■□□□□ 0.57
HLA-DQB2-230ENST00000427449 KIAA1211Q6ZU35 1233 aa18.6■□□□□ 0.57
HLA-DQB2-230ENST00000427449 TET1Q8NFU7 2136 aa18.6■□□□□ 0.57
HLA-DQB2-230ENST00000427449 IL31RAQ8NI17 732 aa18.6■□□□□ 0.57
HLA-DQB2-230ENST00000427449 GLT1D1Q96MS3 346 aa18.6■□□□□ 0.57
HLA-DQB2-230ENST00000427449 PIGSQ96S52 555 aa18.6■□□□□ 0.57
HLA-DQB2-230ENST00000427449 MTA3Q9BTC8 594 aa18.6■□□□□ 0.57
HLA-DQB2-230ENST00000427449 WDR11Q9BZH6 1224 aa18.6■□□□□ 0.57
HLA-DQB2-230ENST00000427449 UMODL1Q5DID0 1318 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms