RNA–Protein interactions for RNA: ENST00000427445.6

TPTE-201, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-201ENST00000427445 EFCAB13Q8IY85 973 aa11.02□□□□□ -0.65
TPTE-201ENST00000427445 RNF10Q8N5U6 811 aaKnown RBP11.02□□□□□ -0.65
TPTE-201ENST00000427445 ZNF384Q8TF68 577 aa11.02□□□□□ -0.65
TPTE-201ENST00000427445 CALML4Q96GE6 196 aa11.02□□□□□ -0.65
TPTE-201ENST00000427445 SELENOOQ9BVL4 669 aa11.02□□□□□ -0.65
TPTE-201ENST00000427445 SH2D4AQ9H788 454 aa11.02□□□□□ -0.65
TPTE-201ENST00000427445 HYOU1Q9Y4L1 999 aa11.02□□□□□ -0.65
TPTE-201ENST00000427445 SSU72P8A0A1W2PR75 194 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 EPHB4P54760 987 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 PSMD2Q13200 908 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 SEPT2Q15019 361 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 NONOQ15233 471 aaKnown RBP eCLIP11.01□□□□□ -0.65
TPTE-201ENST00000427445 MAN2A1Q16706 1144 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 C12orf60Q5U649 245 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 NYXQ9GZU5 481 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 C6orf50Q9HD87 102 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 TRIM10Q9UDY6 481 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 PALM3A6NDB9 673 aaPredicted RBP11.01□□□□□ -0.65
TPTE-201ENST00000427445 GOLGA6BA6NDN3 693 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 ENC1O14682 589 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 SLC26A4O43511 780 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 CPP00450 1065 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 PLCG1P19174 1290 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 PAFAH1B1P43034 410 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 ASIC1P78348 528 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 FAM47AQ5JRC9 791 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 MIIPQ5JXC2 388 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 PROM2Q8N271 834 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 GUF1Q8N442 669 aaKnown RBP11.01□□□□□ -0.65
TPTE-201ENST00000427445 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.01□□□□□ -0.65
TPTE-201ENST00000427445 SYN2Q92777 582 aaPredicted RBP11.01□□□□□ -0.65
TPTE-201ENST00000427445 CAVIN3Q969G5 261 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 SH3GL2Q99962 352 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 IFIH1Q9BYX4 1025 aaKnown RBP11.01□□□□□ -0.65
TPTE-201ENST00000427445 RAB34Q9BZG1 259 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 TMEM60Q9H2L4 133 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 JADE2Q9NQC1 790 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 MAD2L2Q9UI95 211 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 MAPK8IP1Q9UQF2 711 aa11.01□□□□□ -0.65
TPTE-201ENST00000427445 ATXN2Q99700 1313 aaKnown RBP11□□□□□ -0.65
TPTE-201ENST00000427445 RASSF10A6NK89 507 aa11□□□□□ -0.65
TPTE-201ENST00000427445 TFAP4Q01664 338 aa11□□□□□ -0.65
TPTE-201ENST00000427445 MAPK8IP2Q13387 824 aaPredicted RBP11□□□□□ -0.65
TPTE-201ENST00000427445 VWA3BQ502W6 1294 aa11□□□□□ -0.65
TPTE-201ENST00000427445 ANKRD40Q6AI12 368 aa11□□□□□ -0.65
TPTE-201ENST00000427445 UNC13DQ70J99 1090 aa11□□□□□ -0.65
TPTE-201ENST00000427445 NEK8Q86SG6 692 aa11□□□□□ -0.65
TPTE-201ENST00000427445 SPATS2Q86XZ4 545 aaKnown RBP11□□□□□ -0.65
TPTE-201ENST00000427445 CREG2Q8IUH2 290 aa11□□□□□ -0.65
TPTE-201ENST00000427445 PCMTD1Q96MG8 357 aaPredicted RBP11□□□□□ -0.65
TPTE-201ENST00000427445 LACRTQ9GZZ8 138 aa11□□□□□ -0.65
TPTE-201ENST00000427445 RIC8AQ9NPQ8 531 aa11□□□□□ -0.65
TPTE-201ENST00000427445 AGPAT5Q9NUQ2 364 aa11□□□□□ -0.65
TPTE-201ENST00000427445 HDAC6Q9UBN7 1215 aa11□□□□□ -0.65
TPTE-201ENST00000427445 PCDHA13Q9Y5I0 950 aa11□□□□□ -0.65
TPTE-201ENST00000427445 TNRC6CQ9HCJ0 1690 aaKnown RBP11□□□□□ -0.65
TPTE-201ENST00000427445 GOLGA6CA6NDK9 693 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 NMT2O60551 498 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 COBLO75128 1261 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 BAG3O95817 575 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 LDHCP07864 332 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 GOLGA6DP0CG33 693 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 PPP4CP60510 307 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 INF2Q27J81 1249 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 CCDC96Q2M329 555 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 SV2BQ7L1I2 683 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 C10orf67Q8IYJ2 551 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 EIF1ADQ8N9N8 165 aaKnown RBP10.99□□□□□ -0.65
TPTE-201ENST00000427445 C1orf131Q8NDD1 294 aaKnown RBP10.99□□□□□ -0.65
TPTE-201ENST00000427445 WDR66Q8TBY9 1149 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 TRIM34Q9BYJ4 488 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 MCM9Q9NXL9 1143 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 GOLGA6AQ9NYA3 693 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 SIK3Q9Y2K2 1263 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 MYH14Q7Z406 1995 aaKnown RBP10.99□□□□□ -0.65
TPTE-201ENST00000427445 COL24A1Q17RW2 1714 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 RBAK-RBAKDNI3L0D1 243 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 SMIM22K7EJ46 135 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 TFRCP02786 760 aaKnown RBP10.99□□□□□ -0.65
TPTE-201ENST00000427445 FXR2P51116 673 aaKnown RBP eCLIP10.99□□□□□ -0.65
TPTE-201ENST00000427445 KIF11P52732 1056 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 DZIP1Q86YF9 867 aaKnown RBP10.99□□□□□ -0.65
TPTE-201ENST00000427445 ZNF444Q8N0Y2 327 aaPredicted RBP10.99□□□□□ -0.65
TPTE-201ENST00000427445 GPKOWQ92917 476 aaPredicted RBP eCLIP10.99□□□□□ -0.65
TPTE-201ENST00000427445 TSG101Q99816 390 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 NDST4Q9H3R1 872 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 DEF6Q9H4E7 631 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 NAV1Q8NEY1 1877 aa10.99□□□□□ -0.65
TPTE-201ENST00000427445 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
TPTE-201ENST00000427445 A0A087WUV0 522 aaPredicted RBP10.98□□□□□ -0.65
TPTE-201ENST00000427445 GRID2IPA4D2P6 1211 aa10.98□□□□□ -0.65
TPTE-201ENST00000427445 RCCD1A6NED2 376 aa10.98□□□□□ -0.65
TPTE-201ENST00000427445 SRRM3A6NNA2 597 aaPredicted RBP10.98□□□□□ -0.65
TPTE-201ENST00000427445 TSPY3P0CV98 308 aa10.98□□□□□ -0.65
TPTE-201ENST00000427445 TSPY8P0CW00 308 aa10.98□□□□□ -0.65
TPTE-201ENST00000427445 GGCXP38435 758 aa10.98□□□□□ -0.65
TPTE-201ENST00000427445 RPS8P62241 208 aaKnown RBP10.98□□□□□ -0.65
TPTE-201ENST00000427445 SKOR1P84550 965 aa10.98□□□□□ -0.65
TPTE-201ENST00000427445 PDIA5Q14554 519 aa10.98□□□□□ -0.65
TPTE-201ENST00000427445 TXNRD1Q16881 649 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms