RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 NDUFA8P51970 172 aa17.17■□□□□ 0.34
GINS3-203ENST00000426538 RESP18Q5W5W9 173 aa17.17■□□□□ 0.34
GINS3-203ENST00000426538 SHC4Q6S5L8 630 aa17.17■□□□□ 0.34
GINS3-203ENST00000426538 FASTKD5Q7L8L6 764 aaKnown RBP17.17■□□□□ 0.34
GINS3-203ENST00000426538 MCF2L2Q86YR7 1114 aa17.17■□□□□ 0.34
GINS3-203ENST00000426538 NUP62CLQ9H1M0 184 aa17.17■□□□□ 0.34
GINS3-203ENST00000426538 MYPNQ86TC9 1320 aa17.17■□□□□ 0.34
GINS3-203ENST00000426538 VWA3AA6NCI4 1184 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 NEMFO60524 1076 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 HOXA13P31271 388 aaPredicted RBP17.16■□□□□ 0.34
GINS3-203ENST00000426538 USP11P51784 963 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 OAZ1P54368 228 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 SNW1Q13573 536 aaKnown RBP17.16■□□□□ 0.34
GINS3-203ENST00000426538 TREML2Q5T2D2 321 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 CSRNP2Q9H175 543 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 ADAMTS5Q9UNA0 930 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 SYCE3A1L190 88 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 PFKFB1P16118 471 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 HOXA7P31268 230 aaPredicted RBP17.16■□□□□ 0.34
GINS3-203ENST00000426538 SYKP43405 635 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 SPECC1Q5M775 1068 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 PPP4R3AQ6IN85 833 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 DTHD1Q6ZMT9 781 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 FCHSD1Q86WN1 690 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 C4orf32Q8N8J7 132 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 ENGASEQ8NFI3 743 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 TNMDQ9H2S6 317 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 EHMT1Q9H9B1 1298 aa17.16■□□□□ 0.34
GINS3-203ENST00000426538 GCFC2P16383 781 aaKnown RBP17.15■□□□□ 0.34
GINS3-203ENST00000426538 IRX3P78415 501 aaPredicted RBP17.15■□□□□ 0.34
GINS3-203ENST00000426538 GRIN1Q05586 938 aa17.15■□□□□ 0.34
GINS3-203ENST00000426538 SNAPC2Q13487 334 aa17.15■□□□□ 0.34
GINS3-203ENST00000426538 CAMK4Q16566 473 aa17.15■□□□□ 0.34
GINS3-203ENST00000426538 FMR1NBQ8N0W7 255 aaPredicted RBP17.15■□□□□ 0.34
GINS3-203ENST00000426538 TBC1D5Q92609 795 aa17.15■□□□□ 0.34
GINS3-203ENST00000426538 TRERF1Q96PN7 1200 aa17.15■□□□□ 0.34
GINS3-203ENST00000426538 HOMER2Q9NSB8 354 aa17.15■□□□□ 0.34
GINS3-203ENST00000426538 SMCHD1A6NHR9 2005 aa17.14■□□□□ 0.34
GINS3-203ENST00000426538 ZNF202O95125 648 aa17.14■□□□□ 0.33
GINS3-203ENST00000426538 PRPHP41219 470 aa17.14■□□□□ 0.33
GINS3-203ENST00000426538 ZNF445P59923 1031 aa17.14■□□□□ 0.33
GINS3-203ENST00000426538 PABPC4Q13310 644 aaKnown RBP eCLIP17.14■□□□□ 0.33
GINS3-203ENST00000426538 SAMD3Q8N6K7 520 aa17.14■□□□□ 0.33
GINS3-203ENST00000426538 WNK4Q96J92 1243 aa17.14■□□□□ 0.33
GINS3-203ENST00000426538 TMEM60Q9H2L4 133 aa17.14■□□□□ 0.33
GINS3-203ENST00000426538 CLSTN2Q9H4D0 955 aa17.14■□□□□ 0.33
GINS3-203ENST00000426538 MAP3K20Q9NYL2 800 aaKnown RBP17.14■□□□□ 0.33
GINS3-203ENST00000426538 DDX25Q9UHL0 483 aaKnown RBP17.14■□□□□ 0.33
GINS3-203ENST00000426538 KCNH3Q9ULD8 1083 aa17.14■□□□□ 0.33
GINS3-203ENST00000426538 FAM237AA0A1B0GTK4 181 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 SPDYE16A6NNV3 312 aaPredicted RBP17.13■□□□□ 0.33
GINS3-203ENST00000426538 ATP2A1O14983 1001 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 MARCH6O60337 910 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 OR52Z1P0C646 297 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 LONP1P36776 959 aaKnown RBP17.13■□□□□ 0.33
GINS3-203ENST00000426538 ARHGAP4P98171 946 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 PLS1Q14651 629 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 SNRNP48Q6IEG0 339 aaKnown RBP17.13■□□□□ 0.33
GINS3-203ENST00000426538 SDF4Q9BRK5 362 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 AGTPBP1Q9UPW5 1226 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 HPSEQ9Y251 543 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 PTPRFP10586 1907 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 CTAGE5O15320 804 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 TDP2O95551 362 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 ITGBL1O95965 494 aaPredicted RBP17.13■□□□□ 0.33
GINS3-203ENST00000426538 SREBF1P36956 1147 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 TMEM132BQ14DG7 1078 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 CALCRLQ16602 461 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 MB21D1Q8N884 522 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 REPS2Q8NFH8 660 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 CLEC4DQ8WXI8 215 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 TEX13BQ9BXU2 312 aa17.13■□□□□ 0.33
GINS3-203ENST00000426538 ZNF214Q9UL59 606 aaPredicted RBP17.13■□□□□ 0.33
GINS3-203ENST00000426538 PARP14Q460N5 1801 aa17.12■□□□□ 0.33
GINS3-203ENST00000426538 NFIBO00712 420 aa17.12■□□□□ 0.33
GINS3-203ENST00000426538 OSBPP22059 807 aa17.12■□□□□ 0.33
GINS3-203ENST00000426538 ZNF76P36508 570 aa17.12■□□□□ 0.33
GINS3-203ENST00000426538 STAT3P40763 770 aa17.12■□□□□ 0.33
GINS3-203ENST00000426538 HSD17B4P51659 736 aa17.12■□□□□ 0.33
GINS3-203ENST00000426538 MOXD1Q6UVY6 613 aa17.12■□□□□ 0.33
GINS3-203ENST00000426538 LRSAM1Q6UWE0 723 aa17.12■□□□□ 0.33
GINS3-203ENST00000426538 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
GINS3-203ENST00000426538 P2RX7Q99572 595 aaKnown RBP17.12■□□□□ 0.33
GINS3-203ENST00000426538 CYP3A7-CYP3A51PA0A087WV96 503 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 EDIL3O43854 480 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 CYP3A7P24462 503 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 GJA5P36382 358 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 TXLNAP40222 546 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 GTF2A2P52657 109 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 IL17AQ16552 155 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 TKFCQ3LXA3 575 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 MUM1L1Q5H9M0 696 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 CRYGNQ8WXF5 182 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 SYMPKQ92797 1274 aaKnown RBP17.11■□□□□ 0.33
GINS3-203ENST00000426538 EPSTI1Q96J88 318 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 TIGD1Q96MW7 591 aa17.11■□□□□ 0.33
GINS3-203ENST00000426538 ASCC2Q9H1I8 757 aaPredicted RBP17.11■□□□□ 0.33
GINS3-203ENST00000426538 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
GINS3-203ENST00000426538 RNF146Q9NTX7 359 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms