RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 RNF26Q9BY78 433 aaPredicted RBP14.97□□□□□ -0.01
USP42-203ENST00000426246 NAV1Q8NEY1 1877 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 C2orf54Q08AI8 447 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 SPA17Q15506 151 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 SRGAP1Q7Z6B7 1085 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 ZSCAN29Q8IWY8 852 aaPredicted RBP14.97□□□□□ -0.01
USP42-203ENST00000426246 CCDC42Q96M95 316 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 CTAGE1Q96RT6 745 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 CDC23Q9UJX2 597 aa14.97□□□□□ -0.01
USP42-203ENST00000426246 PLEKP08567 350 aaPredicted RBP14.96□□□□□ -0.01
USP42-203ENST00000426246 WDR66Q8TBY9 1149 aa14.96□□□□□ -0.01
USP42-203ENST00000426246 TMEM260Q9NX78 707 aa14.96□□□□□ -0.01
USP42-203ENST00000426246 PDE6BP35913 854 aa14.96□□□□□ -0.01
USP42-203ENST00000426246 EPS15P42566 896 aa14.96□□□□□ -0.01
USP42-203ENST00000426246 RBM5P52756 815 aaKnown RBP eCLIP14.96□□□□□ -0.01
USP42-203ENST00000426246 MAP3K9P80192 1104 aa14.96□□□□□ -0.01
USP42-203ENST00000426246 MDM2Q00987 491 aaPredicted RBP14.96□□□□□ -0.01
USP42-203ENST00000426246 ADD3Q9UEY8 706 aaKnown RBP14.96□□□□□ -0.01
USP42-203ENST00000426246 FAM205AQ6ZU69 1335 aa14.96□□□□□ -0.02
USP42-203ENST00000426246 KIF5BP33176 963 aa14.96□□□□□ -0.02
USP42-203ENST00000426246 SLC16A2P36021 539 aa14.96□□□□□ -0.02
USP42-203ENST00000426246 TMEM139Q8IV31 216 aa14.96□□□□□ -0.02
USP42-203ENST00000426246 DCP1AQ9NPI6 582 aaPredicted RBP14.96□□□□□ -0.02
USP42-203ENST00000426246 SEC63Q9UGP8 760 aaKnown RBP14.96□□□□□ -0.02
USP42-203ENST00000426246 MYO6Q9UM54 1294 aa14.96□□□□□ -0.02
USP42-203ENST00000426246 CCDC93Q567U6 631 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 TCERG1LQ5VWI1 586 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 CYP26C1Q6V0L0 522 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 ABHD10Q9NUJ1 306 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 ADAMTSL1Q8N6G6 1762 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 NID2Q14112 1375 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 FAM196BA6NMK8 535 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 PPP1R3GB7ZBB8 358 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 EIF3JO75822 258 aaKnown RBP14.95□□□□□ -0.02
USP42-203ENST00000426246 ATP1A1P05023 1023 aaKnown RBP14.95□□□□□ -0.02
USP42-203ENST00000426246 LDHBP07195 334 aaKnown RBP14.95□□□□□ -0.02
USP42-203ENST00000426246 SNAP25P60880 206 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 KCTD16Q68DU8 428 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 SH3RF3Q8TEJ3 882 aaPredicted RBP14.95□□□□□ -0.02
USP42-203ENST00000426246 JAKMIP2Q96AA8 810 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 MASTLQ96GX5 879 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 KIF13BQ9NQT8 1826 aa14.95□□□□□ -0.02
USP42-203ENST00000426246 LLGL1Q15334 1064 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 FOXR1Q6PIV2 292 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 TMTC3Q6ZXV5 915 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 RUFY1Q96T51 708 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 KLRF2D3W0D1 207 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 NCK2O43639 380 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 ZEB2O60315 1214 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 TROAPQ12815 778 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 TCP11X2Q5H9J9 407 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 RRAGAQ7L523 313 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 CEP112Q8N8E3 955 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 SCN9AQ15858 1988 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 PLCG1P19174 1290 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 TUBGCP2Q9BSJ2 902 aa14.94□□□□□ -0.02
USP42-203ENST00000426246 SEPT11Q9NVA2 429 aaKnown RBP14.94□□□□□ -0.02
USP42-203ENST00000426246 A0A1B0GTH6 734 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 SMCO2A6NFE2 343 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 POTEMA6NI47 508 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 NKRFO15226 690 aaKnown RBP eCLIP14.93□□□□□ -0.02
USP42-203ENST00000426246 APBA1Q02410 837 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 CABP7Q86V35 215 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 OR8K1Q8NGG5 319 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 RTFDC1Q9BY42 306 aaPredicted RBP14.93□□□□□ -0.02
USP42-203ENST00000426246 MLXIPQ9HAP2 919 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 BCCIPQ9P287 314 aaKnown RBP eCLIP14.93□□□□□ -0.02
USP42-203ENST00000426246 ESYT3A0FGR9 886 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 CCDC40Q4G0X9 1142 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 RABGGTAQ92696 567 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 FERMT2Q96AC1 680 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 GSDMAQ96QA5 445 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 LRWD1Q9UFC0 647 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 NDUFA10O95299 355 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 ZNF18P17022 549 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 ERCC5P28715 1186 aaPredicted RBP14.93□□□□□ -0.02
USP42-203ENST00000426246 ALDH1B1P30837 517 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 TCP10Q12799 353 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 HDXQ7Z353 690 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 DEFB132Q7Z7B7 95 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 TMTC1Q8IUR5 882 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 MMS19Q96T76 1030 aa14.93□□□□□ -0.02
USP42-203ENST00000426246 PACSIN2Q9UNF0 486 aaPredicted RBP14.93□□□□□ -0.02
USP42-203ENST00000426246 ATP2C2O75185 946 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 PPP4CP60510 307 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 KIF5AQ12840 1032 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 SND1Q7KZF4 910 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP42-203ENST00000426246 PHF20Q9BVI0 1012 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 FAM204AQ9H8W3 233 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 BCS1LQ9Y276 419 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP42-203ENST00000426246 ATP1A2P50993 1020 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 SCNN1DP51172 638 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 IRX5P78411 483 aaPredicted RBP14.92□□□□□ -0.02
USP42-203ENST00000426246 CASP8Q14790 479 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 IL17AQ16552 155 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 UBE2SQ16763 222 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 TBC1D10BQ4KMP7 808 aaPredicted RBP14.92□□□□□ -0.02
USP42-203ENST00000426246 C7orf43Q8WVR3 580 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 MTRQ99707 1265 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms