RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 ZNF318Q5VUA4 2279 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 ZNF536O15090 1300 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 TTLL1O95922 423 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 IQCF3P0C7M6 154 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 ALAS1P13196 640 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 NHLH1Q02575 133 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 LEXMQ3ZCV2 418 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 DUSP28Q4G0W2 176 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 SBK1Q52WX2 424 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 BRDTQ58F21 947 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-206ENST00000426196 ZSCAN25Q6NSZ9 544 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 SPRED2Q7Z698 418 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 CEP95Q96GE4 821 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 SNX27Q96L92 541 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 ZBED2Q9BTP6 218 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 KCNH6Q9H252 994 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 ZNF287Q9HBT7 754 aa16.91■□□□□ 0.3
HDAC6-206ENST00000426196 DDX49Q9Y6V7 483 aaKnown RBP16.91■□□□□ 0.3
HDAC6-206ENST00000426196 IGKV6D-41A0A0C4DH26 115 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 MINDY4BA8MYZ0 360 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 TMEM232C9JQI7 657 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 KCNA5P22460 613 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 TMEM63BQ5T3F8 832 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 SLFN13Q68D06 897 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 FAM160B2Q86V87 743 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 ZNF444Q8N0Y2 327 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-206ENST00000426196 CHURC1Q8WUH1 139 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 MTMR4Q9NYA4 1195 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 CYP39A1Q9NYL5 469 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 NOD1Q9Y239 953 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 RAD50Q92878 1312 aa16.9■□□□□ 0.3
HDAC6-206ENST00000426196 LCHNA4D1U4 455 aa16.89■□□□□ 0.29
HDAC6-206ENST00000426196 CHGBP05060 677 aa16.89■□□□□ 0.29
HDAC6-206ENST00000426196 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
HDAC6-206ENST00000426196 NBPF20Q3BBV1 942 aa16.89■□□□□ 0.29
HDAC6-206ENST00000426196 NFRKBQ6P4R8 1299 aa16.89■□□□□ 0.29
HDAC6-206ENST00000426196 GIMAP6Q6P9H5 292 aa16.89■□□□□ 0.29
HDAC6-206ENST00000426196 HAUS7Q99871 368 aa16.89■□□□□ 0.29
HDAC6-206ENST00000426196 WDR11Q9BZH6 1224 aa16.89■□□□□ 0.29
HDAC6-206ENST00000426196 PUS7LQ9H0K6 701 aaKnown RBP16.89■□□□□ 0.29
HDAC6-206ENST00000426196 MTUS1Q9ULD2 1270 aa16.89■□□□□ 0.29
HDAC6-206ENST00000426196 C5orf42Q9H799 3197 aa16.89■□□□□ 0.29
HDAC6-206ENST00000426196 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-206ENST00000426196 ATP5JP18859 108 aa16.88■□□□□ 0.29
HDAC6-206ENST00000426196 WDR5P61964 334 aaKnown RBP16.88■□□□□ 0.29
HDAC6-206ENST00000426196 PTCRAQ6ISU1 281 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-206ENST00000426196 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
HDAC6-206ENST00000426196 CCDC155Q8N6L0 562 aa16.88■□□□□ 0.29
HDAC6-206ENST00000426196 OR6J1Q8NGC5 347 aa16.88■□□□□ 0.29
HDAC6-206ENST00000426196 MORC4Q8TE76 937 aa16.88■□□□□ 0.29
HDAC6-206ENST00000426196 TGS1Q96RS0 853 aaKnown RBP16.88■□□□□ 0.29
HDAC6-206ENST00000426196 ADD3Q9UEY8 706 aaKnown RBP16.88■□□□□ 0.29
HDAC6-206ENST00000426196 DCXO43602 365 aa16.87■□□□□ 0.29
HDAC6-206ENST00000426196 KPNA6O60684 536 aa16.87■□□□□ 0.29
HDAC6-206ENST00000426196 RLBP1P12271 317 aa16.87■□□□□ 0.29
HDAC6-206ENST00000426196 IL9P15248 144 aa16.87■□□□□ 0.29
HDAC6-206ENST00000426196 PTPN11Q06124 597 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-206ENST00000426196 PUS10Q3MIT2 529 aaKnown RBP16.87■□□□□ 0.29
HDAC6-206ENST00000426196 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-206ENST00000426196 STAG1Q8WVM7 1258 aa16.87■□□□□ 0.29
HDAC6-206ENST00000426196 FBXL18Q96ME1 805 aa16.87■□□□□ 0.29
HDAC6-206ENST00000426196 SUGCTQ9HAC7 445 aa16.87■□□□□ 0.29
HDAC6-206ENST00000426196 CFAP54Q96N23 3096 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 USP34Q70CQ2 3546 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 PRDM1O75626 825 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 SLC1A4P43007 532 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 ERVK-21P61565 698 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 MUM1L1Q5H9M0 696 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 CAGE1Q8TC20 777 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 AFAP1L1Q8TED9 768 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 GMCL1Q96IK5 515 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 STRBPQ96SI9 672 aaKnown RBP16.86■□□□□ 0.29
HDAC6-206ENST00000426196 CRBNQ96SW2 442 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 PLIN4Q96Q06 1357 aa16.86■□□□□ 0.29
HDAC6-206ENST00000426196 LOC102724159A0A0B4J2E5 919 aa16.85■□□□□ 0.29
HDAC6-206ENST00000426196 GSG1L2A8MUP6 293 aa16.85■□□□□ 0.29
HDAC6-206ENST00000426196 NKRFO15226 690 aaKnown RBP eCLIP16.85■□□□□ 0.29
HDAC6-206ENST00000426196 PLA2G6O60733 806 aa16.85■□□□□ 0.29
HDAC6-206ENST00000426196 TSPY3P0CV98 308 aa16.85■□□□□ 0.29
HDAC6-206ENST00000426196 TSPY8P0CW00 308 aa16.85■□□□□ 0.29
HDAC6-206ENST00000426196 TDO2P48775 406 aa16.85■□□□□ 0.29
HDAC6-206ENST00000426196 ALDH5A1P51649 535 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-206ENST00000426196 PPP2R5BQ15173 497 aa16.85■□□□□ 0.29
HDAC6-206ENST00000426196 PWP2Q15269 919 aaKnown RBP16.85■□□□□ 0.29
HDAC6-206ENST00000426196 RAD9AQ99638 391 aa16.85■□□□□ 0.29
HDAC6-206ENST00000426196 CCPG1Q9ULG6 757 aa16.85■□□□□ 0.29
HDAC6-206ENST00000426196 GRXCR2A6NFK2 248 aa16.84■□□□□ 0.29
HDAC6-206ENST00000426196 HMMRO75330 724 aa16.84■□□□□ 0.29
HDAC6-206ENST00000426196 GJB5O95377 273 aa16.84■□□□□ 0.29
HDAC6-206ENST00000426196 PARNO95453 639 aaKnown RBP16.84■□□□□ 0.29
HDAC6-206ENST00000426196 DEFB103AP81534 67 aa16.84■□□□□ 0.29
HDAC6-206ENST00000426196 CNKSR3Q6P9H4 555 aa16.84■□□□□ 0.29
HDAC6-206ENST00000426196 TMCO2Q7Z6W1 182 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-206ENST00000426196 PPP1R13LQ8WUF5 828 aa16.84■□□□□ 0.29
HDAC6-206ENST00000426196 PURBQ96QR8 312 aaKnown RBP16.84■□□□□ 0.29
HDAC6-206ENST00000426196 FAM50BQ9Y247 325 aa16.84■□□□□ 0.29
HDAC6-206ENST00000426196 MYO7AQ13402 2215 aa16.84■□□□□ 0.29
HDAC6-206ENST00000426196 ZDBF2Q9HCK1 2354 aa16.84■□□□□ 0.29
HDAC6-206ENST00000426196 RBM47A0AV96 593 aaKnown RBP16.83■□□□□ 0.28
HDAC6-206ENST00000426196 LINC01553A4QN01 128 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms