RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 NCK2O43639 380 aa15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 CCNT1O60563 726 aaKnown RBP15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 CYLC1P35663 651 aaPredicted RBP15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 C12orf60Q5U649 245 aa15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 AFAP1L1Q8TED9 768 aa15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 LRRC1Q9BTT6 524 aa15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 BARHL2Q9NY43 387 aa15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 SAP30BPQ9UHR5 308 aaKnown RBP15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 RPS6KA5O75582 802 aa15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 NFRKBQ6P4R8 1299 aa15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 GPR101Q96P66 508 aaPredicted RBP15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 TMEM47Q9BQJ4 181 aa15.83■□□□□ 0.12
TPM3P9-201ENST00000424846 CCDC96Q2M329 555 aa15.82■□□□□ 0.12
TPM3P9-201ENST00000424846 C2CD5Q86YS7 1000 aa15.82■□□□□ 0.12
TPM3P9-201ENST00000424846 DHTKD1Q96HY7 919 aaPredicted RBP15.82■□□□□ 0.12
TPM3P9-201ENST00000424846 VIPAS39Q9H9C1 493 aa15.82■□□□□ 0.12
TPM3P9-201ENST00000424846 VAV2P52735 878 aa15.82■□□□□ 0.12
TPM3P9-201ENST00000424846 SECISBP2LQ93073 1101 aaKnown RBP15.82■□□□□ 0.12
TPM3P9-201ENST00000424846 MKNK2Q9HBH9 465 aa15.82■□□□□ 0.12
TPM3P9-201ENST00000424846 VAT1LQ9HCJ6 419 aa15.82■□□□□ 0.12
TPM3P9-201ENST00000424846 SH3GLB2Q9NR46 395 aa15.82■□□□□ 0.12
TPM3P9-201ENST00000424846 RPS8P62241 208 aaKnown RBP15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 DGKHQ86XP1 1220 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 POLD4Q9HCU8 107 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 ZNHIT6Q9NWK9 470 aaKnown RBP15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 TMEM260Q9NX78 707 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 NUTM2BA6NNL0 878 aaPredicted RBP15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 NUTM2EB1AL46 878 aaPredicted RBP15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 TUBBP07437 444 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 KIF5AQ12840 1032 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 DDB1Q16531 1140 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 USP17L2Q6R6M4 530 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 ZNF662Q6ZS27 426 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 DYMQ7RTS9 669 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 TMC4Q7Z404 712 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 DZIP1Q86YF9 867 aaKnown RBP15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 LINC00116Q8NCU8 138 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 CCDC42Q96M95 316 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 SRP68Q9UHB9 627 aaKnown RBP15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 SNX12Q9UMY4 172 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 TARSL2A2RTX5 802 aaKnown RBP15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 IVLP07476 585 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 OR52Z1P0C646 297 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 EIF4A3P38919 411 aaKnown RBP15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 KCTD19Q17RG1 926 aaPredicted RBP15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 TTC19Q6DKK2 380 aaPredicted RBP15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 TGFBRAP1Q8WUH2 860 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 SIK3Q9Y2K2 1263 aa15.81■□□□□ 0.12
TPM3P9-201ENST00000424846 PALM3A6NDB9 673 aaPredicted RBP15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 KLRF2D3W0D1 207 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 TSPY3P0CV98 308 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 TSPY8P0CW00 308 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 SND1Q7KZF4 910 aaKnown RBP eCLIP15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 ZSCAN29Q8IWY8 852 aaPredicted RBP15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 CCDC170Q8IYT3 715 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 ERGIC2Q96RQ1 377 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 IFIH1Q9BYX4 1025 aaKnown RBP15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 PCDHA13Q9Y5I0 950 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 RREB1Q92766 1687 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 MYMKA6NI61 221 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 NAPAP54920 295 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 APBA1Q02410 837 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 CKAP4Q07065 602 aaKnown RBP15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 LRRC41Q15345 812 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 PTF1AQ7RTS3 328 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 MAPKAPK5Q8IW41 473 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 TSEN2Q8NCE0 465 aaKnown RBP15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 DAGLBQ8NCG7 672 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 AENQ8WTP8 325 aaKnown RBP15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 C7orf25Q9BPX7 421 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 NUDT12Q9BQG2 462 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 ACBD3Q9H3P7 528 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 MMRN2Q9H8L6 949 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 BLOC1S4Q9NUP1 217 aa15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 BIN2Q9UBW5 565 aaPredicted RBP15.8■□□□□ 0.12
TPM3P9-201ENST00000424846 ZPR1O75312 459 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 IPO7O95373 1038 aaKnown RBP15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 TXKP42681 527 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 KIF11P52732 1056 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 GJA10Q969M2 543 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 MS4A14Q96JA4 679 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 UIMC1Q96RL1 719 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 CRACR2AQ9BSW2 395 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 SH2D4AQ9H788 454 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 TCP11L1Q9NUJ3 509 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 GOLGB1Q14789 3259 aaKnown RBP15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 SMCO2A6NFE2 343 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 LRRC53A6NM62 1247 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 TBCKQ8TEA7 893 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 SMARCC1Q92922 1105 aaPredicted RBP15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 NUP58Q9BVL2 599 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 UBA5Q9GZZ9 404 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 PLAGL2Q9UPG8 496 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 ZNF652Q9Y2D9 606 aa15.79■□□□□ 0.12
TPM3P9-201ENST00000424846 ANO9A1A5B4 782 aa15.78■□□□□ 0.12
TPM3P9-201ENST00000424846 EDIL3O43854 480 aa15.78■□□□□ 0.12
TPM3P9-201ENST00000424846 RASA1P20936 1047 aa15.78■□□□□ 0.12
TPM3P9-201ENST00000424846 GRB10Q13322 594 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms