RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 ERLIN1O75477 346 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 UFL1O94874 794 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
VPS8-204ENST00000424463 ZNF131P52739 623 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 LAMB3Q13751 1172 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 CDCA2Q69YH5 1023 aaPredicted RBP9.53□□□□□ -0.88
VPS8-204ENST00000424463 CTCFLQ8NI51 663 aaPredicted RBP9.53□□□□□ -0.88
VPS8-204ENST00000424463 TCP11Q8WWU5 503 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 C8orf76Q96K31 380 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 EPAS1Q99814 870 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 KIF9Q9HAQ2 790 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 ST7Q9NRC1 585 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 SLC12A7Q9Y666 1083 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 A0A1B0GUL6 1792 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 CCDC69A6NI79 296 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 GOLGA8AA7E2F4 631 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 EIF3CLB5ME19 914 aaKnown RBP9.52□□□□□ -0.88
VPS8-204ENST00000424463 POLR3DP05423 398 aaPredicted RBP9.52□□□□□ -0.88
VPS8-204ENST00000424463 CYP2D6P10635 497 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 CORO7P57737 925 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 CAMK4Q16566 473 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 OLFM4Q6UX06 510 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 SDCCAG8Q86SQ7 713 aaPredicted RBP9.52□□□□□ -0.88
VPS8-204ENST00000424463 LRRC49Q8IUZ0 686 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 CMTR1Q8N1G2 835 aaKnown RBP9.52□□□□□ -0.88
VPS8-204ENST00000424463 SPIRE2Q8WWL2 714 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 ZBTB10Q96DT7 871 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 USP28Q96RU2 1077 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 EIF3CQ99613 913 aaKnown RBP9.52□□□□□ -0.88
VPS8-204ENST00000424463 TSPY26PQ9H489 355 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 POLLQ9UGP5 575 aa9.52□□□□□ -0.88
VPS8-204ENST00000424463 ELP1O95163 1332 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 UBR3Q6ZT12 1888 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 RANBP6O60518 1105 aaKnown RBP9.52□□□□□ -0.89
VPS8-204ENST00000424463 LIFRP42702 1097 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 RANBP1P43487 201 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 MNAT1P51948 309 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 SEPT2Q15019 361 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 ARHGEF6Q15052 776 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 DIXDC1Q155Q3 683 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 MSL1Q68DK7 614 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 ZNF772Q68DY9 489 aaPredicted RBP9.52□□□□□ -0.89
VPS8-204ENST00000424463 SGMS1Q86VZ5 419 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 DZIP1Q86YF9 867 aaKnown RBP9.52□□□□□ -0.89
VPS8-204ENST00000424463 LILRB2Q8N423 598 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 SMYD1Q8NB12 490 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 AKT1S1Q96B36 256 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 CDHR1Q96JP9 859 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 SPACA7Q96KW9 195 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 CCDC68Q9H2F9 335 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 ATP6V0A2Q9Y487 856 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 GOLGB1Q14789 3259 aaKnown RBP9.52□□□□□ -0.89
VPS8-204ENST00000424463 CACNA1SQ13698 1873 aa9.52□□□□□ -0.89
VPS8-204ENST00000424463 DYTNA2CJ06 578 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 GOLGA6L4A6NEF3 574 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 SGTAO43765 313 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 LDHBP07195 334 aaKnown RBP9.51□□□□□ -0.89
VPS8-204ENST00000424463 CSE1LP55060 971 aaKnown RBP9.51□□□□□ -0.89
VPS8-204ENST00000424463 TRIM29Q14134 588 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 WTAPQ15007 396 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 NTRK3Q16288 839 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 PTPROQ16827 1216 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 SPDYCQ5MJ68 293 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 CPLX2Q6PUV4 134 aaKnown RBP9.51□□□□□ -0.89
VPS8-204ENST00000424463 GBP6Q6ZN66 633 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 SPATS2Q86XZ4 545 aaKnown RBP9.51□□□□□ -0.89
VPS8-204ENST00000424463 SH3GL1Q99961 368 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 CORO1BQ9BR76 489 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 BRIP1Q9BX63 1249 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 DCP1AQ9NPI6 582 aaPredicted RBP9.51□□□□□ -0.89
VPS8-204ENST00000424463 GGA1Q9UJY5 639 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 PDS5AQ29RF7 1337 aaKnown RBP9.51□□□□□ -0.89
VPS8-204ENST00000424463 A6NJR5 290 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 KIF28PB7ZC32 967 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 PLSCR1O15162 318 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 PIK3CAP42336 1068 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 CLCN2P51788 898 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 GNPTABQ3T906 1256 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 EGFLAMQ63HQ2 1017 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 OLFML1Q6UWY5 402 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 ZNF804AQ7Z570 1209 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 DCLK2Q8N568 766 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 IWS1Q96ST2 819 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 ALG1Q9BT22 464 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
VPS8-204ENST00000424463 CD209Q9NNX6 404 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 DACT1Q9NYF0 836 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.51□□□□□ -0.89
VPS8-204ENST00000424463 CFAP45Q9UL16 551 aa9.51□□□□□ -0.89
VPS8-204ENST00000424463 hCG_2014768A0A024R1R8 64 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 LINC00854A0A1B0GVQ3 168 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 C6orf229H3BNL8 230 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 NR1I2O75469 434 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 USP17L8P0C7I0 530 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 GUCY1A2P33402 732 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 TSPAN7P41732 249 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 TBC1D16Q8TBP0 767 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 WDR66Q8TBY9 1149 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 SH3RF3Q8TEJ3 882 aaPredicted RBP9.5□□□□□ -0.89
VPS8-204ENST00000424463 NUP133Q8WUM0 1156 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms