RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 TAF1CQ15572 869 aaPredicted RBP16.09■□□□□ 0.17
ACTN4-203ENST00000424234 WWC2Q6AWC2 1192 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 OTUD7BQ6GQQ9 843 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 CKAP2LQ8IYA6 745 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 REM2Q8IYK8 340 aaPredicted RBP16.09■□□□□ 0.17
ACTN4-203ENST00000424234 MB21D1Q8N884 522 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 GTF3C2Q8WUA4 911 aaPredicted RBP16.09■□□□□ 0.17
ACTN4-203ENST00000424234 SHISA4Q96DD7 197 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 TXNRD2Q9NNW7 524 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 BTBD7Q9P203 1132 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 ZBED4O75132 1171 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 YEATS4O95619 227 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 ICAM1P05362 532 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 TPM3P06753 285 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 OAZ1P54368 228 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 PAGR1Q9BTK6 254 aa16.09■□□□□ 0.17
ACTN4-203ENST00000424234 RAVER2Q9HCJ3 691 aaKnown RBP16.09■□□□□ 0.17
ACTN4-203ENST00000424234 hCG_1984214I3L0E3 225 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 STXBP3O00186 592 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 ATP2A1O14983 1001 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 USH1GQ495M9 461 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 ANO6Q4KMQ2 910 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 TYW1BQ6NUM6 668 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 HEATR3Q7Z4Q2 680 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 FBXO11Q86XK2 927 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 CPXCR1Q8N123 301 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 ZNF713Q8N859 430 aaPredicted RBP16.08■□□□□ 0.16
ACTN4-203ENST00000424234 KCNG4Q8TDN1 519 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 AGBL1Q96MI9 1066 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 ALG1Q9BT22 464 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 AMNQ9BXJ7 453 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 CCPG1Q9ULG6 757 aa16.08■□□□□ 0.16
ACTN4-203ENST00000424234 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
ACTN4-203ENST00000424234 A0A1W2PQ27 194 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 A0A1W2PQ64 194 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 A0A1W2PQD8 194 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 ME1P48163 572 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 GCLCP48506 637 aaPredicted RBP16.07■□□□□ 0.16
ACTN4-203ENST00000424234 FAM160A1Q05DH4 1040 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 CRHR2Q13324 411 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 SNRNP48Q6IEG0 339 aaKnown RBP16.07■□□□□ 0.16
ACTN4-203ENST00000424234 WASF1Q92558 559 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 COA7Q96BR5 231 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 TEX13BQ9BXU2 312 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 FTOQ9C0B1 505 aaKnown RBP eCLIP16.07■□□□□ 0.168e-20■■□□□ 11.6
ACTN4-203ENST00000424234 CBX8Q9HC52 389 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 POLR3EQ9NVU0 708 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 VPS54Q9P1Q0 977 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 RBPJLQ9UBG7 517 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 RABGAP1Q9Y3P9 1069 aa16.07■□□□□ 0.16
ACTN4-203ENST00000424234 CTDP1Q9Y5B0 961 aaPredicted RBP16.07■□□□□ 0.16
ACTN4-203ENST00000424234 GOLGA6L6A8MZA4 724 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 KINO60870 393 aaKnown RBP16.06■□□□□ 0.16
ACTN4-203ENST00000424234 ALDH1A1P00352 501 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 ERVK-9P63128 1117 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 ERVK-24P63145 666 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 MYSM1Q5VVJ2 828 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 ADALQ6DHV7 355 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 ANKRD13CQ8N6S4 541 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 FSIP1Q8NA03 581 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 LINC00301Q8NCQ3 95 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 ENGASEQ8NFI3 743 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 MRPS27Q92552 414 aaKnown RBP16.06■□□□□ 0.16
ACTN4-203ENST00000424234 SPATC1LQ9H0A9 340 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 GOLPH3LQ9H4A5 285 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 GJB4Q9NTQ9 266 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 MORF4L1Q9UBU8 362 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 PCDHA1Q9Y5I3 950 aa16.06■□□□□ 0.16
ACTN4-203ENST00000424234 ABCB11O95342 1321 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 CA12O43570 354 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 TLR2O60603 784 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 BCRP11274 1271 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 SNW1Q13573 536 aaKnown RBP16.05■□□□□ 0.16
ACTN4-203ENST00000424234 PLS1Q14651 629 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 STK38Q15208 465 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 FAM110CQ1W6H9 321 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 PPP1R18Q6NYC8 613 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 ZFYVE28Q9HCC9 887 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 RIPK3Q9Y572 518 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
ACTN4-203ENST00000424234 OPLAHO14841 1288 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 AP5Z1O43299 807 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 ALAS1P13196 640 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 STAT3P40763 770 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 TERF1P54274 439 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 NAPAP54920 295 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 PLCB2Q00722 1185 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 SF3A1Q15459 793 aaKnown RBP16.04■□□□□ 0.16
ACTN4-203ENST00000424234 SH3GLB2Q9NR46 395 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 HOMER2Q9NSB8 354 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 CPA4Q9UI42 421 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 PNMA2Q9UL42 364 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 PCDHA7Q9UN72 937 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 WDR81Q562E7 1941 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 TPM2P07951 284 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 ZNF165P49910 485 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 STX1AQ16623 288 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 Q3C1V9 767 aa16.04■□□□□ 0.16
ACTN4-203ENST00000424234 LUZP1Q86V48 1076 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms