RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 B4DLN1 442 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 DNM1LO00429 736 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 ZBTB5O15062 677 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 SNAI1O95863 264 aaPredicted RBP12.71□□□□□ -0.37
USP49-204ENST00000423567 ZNF865P0CJ78 1059 aaPredicted RBP12.71□□□□□ -0.37
USP49-204ENST00000423567 CALML3P27482 149 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 GNAQP50148 359 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 MRPL12P52815 198 aaKnown RBP12.71□□□□□ -0.37
USP49-204ENST00000423567 ACVR2BQ13705 512 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 ANO1Q5XXA6 986 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.37
USP49-204ENST00000423567 HOMER1Q86YM7 354 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 RGS22Q8NE09 1264 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 CLEC4DQ8WXI8 215 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 LZTS2Q9BRK4 669 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 MAF1Q9H063 256 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 XPNPEP3Q9NQH7 507 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 NR2E3Q9Y5X4 410 aa12.71□□□□□ -0.37
USP49-204ENST00000423567 LOC102724159A0A0B4J2E5 919 aa12.7□□□□□ -0.38
USP49-204ENST00000423567 SOWAHBA6NEL2 793 aa12.7□□□□□ -0.38
USP49-204ENST00000423567 EPB41L2O43491 1005 aaKnown RBP12.7□□□□□ -0.38
USP49-204ENST00000423567 EVI5O60447 810 aa12.7□□□□□ -0.38
USP49-204ENST00000423567 HSPA4P34932 840 aa12.7□□□□□ -0.38
USP49-204ENST00000423567 RPS6P62753 249 aaKnown RBP12.7□□□□□ -0.38
USP49-204ENST00000423567 PWP2Q15269 919 aaKnown RBP12.7□□□□□ -0.38
USP49-204ENST00000423567 RNF180Q86T96 592 aa12.7□□□□□ -0.38
USP49-204ENST00000423567 FGD4Q96M96 766 aa12.7□□□□□ -0.38
USP49-204ENST00000423567 LRRC2Q9BYS8 371 aa12.7□□□□□ -0.38
USP49-204ENST00000423567 SPC25Q9HBM1 224 aa12.7□□□□□ -0.38
USP49-204ENST00000423567 GPHNQ9NQX3 736 aaPredicted RBP12.7□□□□□ -0.38
USP49-204ENST00000423567 PCDHA1Q9Y5I3 950 aa12.7□□□□□ -0.38
USP49-204ENST00000423567 EIF5BO60841 1220 aaKnown RBP12.69□□□□□ -0.38
USP49-204ENST00000423567 PSMA5P28066 241 aa12.69□□□□□ -0.38
USP49-204ENST00000423567 ALDH5A1P51649 535 aaPredicted RBP12.69□□□□□ -0.38
USP49-204ENST00000423567 GJC2Q5T442 439 aaPredicted RBP12.69□□□□□ -0.38
USP49-204ENST00000423567 SLC30A10Q6XR72 485 aa12.69□□□□□ -0.38
USP49-204ENST00000423567 NOL8Q76FK4 1167 aaKnown RBP12.69□□□□□ -0.38
USP49-204ENST00000423567 SGMS1Q86VZ5 419 aa12.69□□□□□ -0.38
USP49-204ENST00000423567 RRP36Q96EU6 259 aaKnown RBP12.69□□□□□ -0.38
USP49-204ENST00000423567 JAKMIP1Q96N16 626 aaKnown RBP12.69□□□□□ -0.38
USP49-204ENST00000423567 PIGSQ96S52 555 aa12.69□□□□□ -0.38
USP49-204ENST00000423567 MYL10Q9BUA6 226 aa12.69□□□□□ -0.38
USP49-204ENST00000423567 RIOX1Q9H6W3 641 aa12.69□□□□□ -0.38
USP49-204ENST00000423567 SEC63Q9UGP8 760 aaKnown RBP12.69□□□□□ -0.38
USP49-204ENST00000423567 PNMA6FA0A0J9YX94 578 aa12.68□□□□□ -0.38
USP49-204ENST00000423567 DUSP11O75319 330 aaKnown RBP12.68□□□□□ -0.38
USP49-204ENST00000423567 SMARCA1P28370 1054 aa12.68□□□□□ -0.38
USP49-204ENST00000423567 EXOSC10Q01780 885 aaKnown RBP12.68□□□□□ -0.38
USP49-204ENST00000423567 PDE4DQ08499 809 aa12.68□□□□□ -0.38
USP49-204ENST00000423567 ADCK5Q3MIX3 580 aa12.68□□□□□ -0.38
USP49-204ENST00000423567 CCDC144BQ3MJ40 725 aa12.68□□□□□ -0.38
USP49-204ENST00000423567 BLOC1S2Q6QNY1 142 aa12.68□□□□□ -0.38
USP49-204ENST00000423567 MICU3Q86XE3 530 aa12.68□□□□□ -0.38
USP49-204ENST00000423567 DNERQ8NFT8 737 aa12.68□□□□□ -0.38
USP49-204ENST00000423567 MTMR8Q96EF0 704 aa12.68□□□□□ -0.38
USP49-204ENST00000423567 SENP6Q9GZR1 1112 aaPredicted RBP12.68□□□□□ -0.38
USP49-204ENST00000423567 VTA1Q9NP79 307 aa12.68□□□□□ -0.38
USP49-204ENST00000423567 ZNFX1Q9P2E3 1918 aaKnown RBP12.67□□□□□ -0.38
USP49-204ENST00000423567 PGK1P00558 417 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 CFBP00751 764 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 COL6A1P12109 1028 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 TNFAIP2Q03169 654 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 LRRC41Q15345 812 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 EEPD1Q7L9B9 569 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 FANCBQ8NB91 859 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 NSUN6Q8TEA1 469 aaKnown RBP12.67□□□□□ -0.38
USP49-204ENST00000423567 PIBF1Q8WXW3 757 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 KCNB2Q92953 911 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 TCEANC2Q96MN5 208 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 PURBQ96QR8 312 aaKnown RBP12.67□□□□□ -0.38
USP49-204ENST00000423567 SPZ1Q9BXG8 430 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 RBM28Q9NW13 759 aaKnown RBP12.67□□□□□ -0.38
USP49-204ENST00000423567 MAP3K20Q9NYL2 800 aaKnown RBP12.67□□□□□ -0.38
USP49-204ENST00000423567 NAP1L2Q9ULW6 460 aaPredicted RBP12.67□□□□□ -0.38
USP49-204ENST00000423567 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 PLXNA1Q9UIW2 1896 aa12.67□□□□□ -0.38
USP49-204ENST00000423567 BRCA2P51587 3418 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 ZBTB43O43298 467 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 CYTH3O43739 400 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 C6orf222P0C671 652 aaPredicted RBP12.66□□□□□ -0.38
USP49-204ENST00000423567 RXRAP19793 462 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 IER5LQ5T953 404 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 IQSEC1Q6DN90 963 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 RAB11FIP4Q86YS3 637 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 FBXO16Q8IX29 292 aaPredicted RBP12.66□□□□□ -0.38
USP49-204ENST00000423567 C7orf61Q8IZ16 206 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 SAMD3Q8N6K7 520 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 PCSK9Q8NBP7 692 aaKnown RBP12.66□□□□□ -0.38
USP49-204ENST00000423567 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
USP49-204ENST00000423567 MORC4Q8TE76 937 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 LENG1Q96BZ8 264 aaPredicted RBP12.66□□□□□ -0.38
USP49-204ENST00000423567 KATNBL1Q9H079 304 aa12.66□□□□□ -0.38
USP49-204ENST00000423567 ASTN1O14525 1302 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 SYNRGQ9UMZ2 1314 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 PDE4DIPQ5VU43 2346 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 KLF18A0A0U1RQI7 1052 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 GOLGA8AA7E2F4 631 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 GOLGA8BA8MQT2 603 aa12.65□□□□□ -0.38
USP49-204ENST00000423567 H0YGN5 161 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms