RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PNMA2Q9UL42 364 aa17.76■□□□□ 0.43
USB1-202ENST00000423271 MYH6P13533 1939 aa17.75■□□□□ 0.43
USB1-202ENST00000423271 KIAA0355O15063 1070 aa17.75■□□□□ 0.43
USB1-202ENST00000423271 PARP1P09874 1014 aaKnown RBP17.75■□□□□ 0.43
USB1-202ENST00000423271 FAAP100Q0VG06 881 aa17.75■□□□□ 0.43
USB1-202ENST00000423271 C9orf50Q5SZB4 431 aa17.75■□□□□ 0.43
USB1-202ENST00000423271 IFIT1BQ5T764 474 aaKnown RBP17.75■□□□□ 0.43
USB1-202ENST00000423271 ANKRD33Q7Z3H0 272 aa17.75■□□□□ 0.43
USB1-202ENST00000423271 ELP1O95163 1332 aa17.74■□□□□ 0.43
USB1-202ENST00000423271 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
USB1-202ENST00000423271 FSCN1Q16658 493 aaKnown RBP17.74■□□□□ 0.43
USB1-202ENST00000423271 QRICH1Q2TAL8 776 aa17.74■□□□□ 0.43
USB1-202ENST00000423271 KIAA1211Q6ZU35 1233 aa17.74■□□□□ 0.43
USB1-202ENST00000423271 STOX1Q6ZVD7 989 aa17.74■□□□□ 0.43
USB1-202ENST00000423271 Q7L0L9 218 aa17.74■□□□□ 0.43
USB1-202ENST00000423271 STAG2Q8N3U4 1231 aa17.74■□□□□ 0.43
USB1-202ENST00000423271 VTI1AQ96AJ9 217 aa17.74■□□□□ 0.43
USB1-202ENST00000423271 TOX2Q96NM4 488 aa17.74■□□□□ 0.43
USB1-202ENST00000423271 TMEM39AQ9NV64 488 aa17.74■□□□□ 0.43
USB1-202ENST00000423271 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
USB1-202ENST00000423271 COL6A3P12111 3177 aa17.74■□□□□ 0.43
USB1-202ENST00000423271 A0A0U1RQG5 324 aaPredicted RBP17.73■□□□□ 0.43
USB1-202ENST00000423271 DCDC2CA8MYV0 355 aa17.73■□□□□ 0.43
USB1-202ENST00000423271 DHX16O60231 1041 aaKnown RBP17.73■□□□□ 0.43
USB1-202ENST00000423271 CDK7P50613 346 aa17.73■□□□□ 0.43
USB1-202ENST00000423271 SHHQ15465 462 aa17.73■□□□□ 0.43
USB1-202ENST00000423271 IQSEC1Q6DN90 963 aa17.73■□□□□ 0.43
USB1-202ENST00000423271 CXCL17Q6UXB2 119 aa17.73■□□□□ 0.43
USB1-202ENST00000423271 TBC1D5Q92609 795 aa17.73■□□□□ 0.43
USB1-202ENST00000423271 AP5M1Q9H0R1 490 aa17.73■□□□□ 0.43
USB1-202ENST00000423271 JMJD4Q9H9V9 463 aa17.73■□□□□ 0.43
USB1-202ENST00000423271 SENP2Q9HC62 589 aa17.73■□□□□ 0.43
USB1-202ENST00000423271 VAT1LQ9HCJ6 419 aa17.73■□□□□ 0.43
USB1-202ENST00000423271 ABCB11O95342 1321 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 LOC102724159A0A0B4J2E5 919 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 E7EWF7 191 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 ARVCFO00192 962 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 RAG1P15918 1043 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 EDNRBP24530 442 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 EPHB4P54760 987 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 TRDNQ13061 729 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 PWP2Q15269 919 aaKnown RBP17.72■□□□□ 0.43
USB1-202ENST00000423271 GPR153Q6NV75 609 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 COL20A1Q9P218 1284 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 TBX21Q9UL17 535 aa17.72■□□□□ 0.43
USB1-202ENST00000423271 RBM47A0AV96 593 aaKnown RBP17.71■□□□□ 0.43
USB1-202ENST00000423271 PDE4DQ08499 809 aa17.71■□□□□ 0.43
USB1-202ENST00000423271 DUSP28Q4G0W2 176 aa17.71■□□□□ 0.43
USB1-202ENST00000423271 CHST3Q7LGC8 479 aa17.71■□□□□ 0.43
USB1-202ENST00000423271 DEFB123Q8N688 67 aa17.71■□□□□ 0.43
USB1-202ENST00000423271 RGS22Q8NE09 1264 aa17.71■□□□□ 0.43
USB1-202ENST00000423271 DNERQ8NFT8 737 aa17.71■□□□□ 0.43
USB1-202ENST00000423271 MAP4K1Q92918 833 aa17.71■□□□□ 0.43
USB1-202ENST00000423271 WDR11Q9BZH6 1224 aa17.71■□□□□ 0.43
USB1-202ENST00000423271 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
USB1-202ENST00000423271 RBM8AQ9Y5S9 174 aaKnown RBP17.71■□□□□ 0.43
USB1-202ENST00000423271 MROH7Q68CQ1 1323 aa17.71■□□□□ 0.42
USB1-202ENST00000423271 KLRF2D3W0D1 207 aa17.7■□□□□ 0.42
USB1-202ENST00000423271 IFIT3O14879 490 aaKnown RBP17.7■□□□□ 0.42
USB1-202ENST00000423271 ANTXR2P58335 489 aa17.7■□□□□ 0.42
USB1-202ENST00000423271 SLC35G1Q2M3R5 365 aa17.7■□□□□ 0.42
USB1-202ENST00000423271 RALYLQ86SE5 291 aaKnown RBP17.7■□□□□ 0.42
USB1-202ENST00000423271 FBXO11Q86XK2 927 aa17.7■□□□□ 0.42
USB1-202ENST00000423271 FAM126BQ8IXS8 530 aa17.7■□□□□ 0.42
USB1-202ENST00000423271 NCOA7Q8NI08 942 aa17.7■□□□□ 0.42
USB1-202ENST00000423271 SYTL5Q8TDW5 730 aaPredicted RBP17.7■□□□□ 0.42
USB1-202ENST00000423271 Q9Y3F1 56 aa17.7■□□□□ 0.42
USB1-202ENST00000423271 BAZ2BQ9UIF8 2168 aaKnown RBP17.7■□□□□ 0.42
USB1-202ENST00000423271 GRIN2DO15399 1336 aa17.7■□□□□ 0.42
USB1-202ENST00000423271 PALM3A6NDB9 673 aaPredicted RBP17.69■□□□□ 0.42
USB1-202ENST00000423271 PPP1R11O60927 126 aaPredicted RBP17.69■□□□□ 0.42
USB1-202ENST00000423271 PSMC6P62333 389 aa17.69■□□□□ 0.42
USB1-202ENST00000423271 FPGSQ05932 587 aa17.69■□□□□ 0.42
USB1-202ENST00000423271 GRM4Q14833 912 aa17.69■□□□□ 0.42
USB1-202ENST00000423271 MB21D2Q8IYB1 491 aaPredicted RBP17.69■□□□□ 0.42
USB1-202ENST00000423271 SLC43A3Q8NBI5 491 aa17.69■□□□□ 0.42
USB1-202ENST00000423271 COPS5Q92905 334 aa17.69■□□□□ 0.42
USB1-202ENST00000423271 TAAR1Q96RJ0 339 aa17.69■□□□□ 0.42
USB1-202ENST00000423271 OPLAHO14841 1288 aa17.68■□□□□ 0.42
USB1-202ENST00000423271 ZEB2O60315 1214 aa17.68■□□□□ 0.42
USB1-202ENST00000423271 CABYRO75952 493 aa17.68■□□□□ 0.42
USB1-202ENST00000423271 TIMP1P01033 207 aa17.68■□□□□ 0.42
USB1-202ENST00000423271 ITGA7Q13683 1181 aa17.68■□□□□ 0.42
USB1-202ENST00000423271 PPP2R5BQ15173 497 aa17.68■□□□□ 0.42
USB1-202ENST00000423271 OR6J1Q8NGC5 347 aa17.68■□□□□ 0.42
USB1-202ENST00000423271 MTMR8Q96EF0 704 aa17.68■□□□□ 0.42
USB1-202ENST00000423271 MPHOSPH6Q99547 160 aaKnown RBP17.68■□□□□ 0.42
USB1-202ENST00000423271 PPP1R12CQ9BZL4 782 aa17.68■□□□□ 0.42
USB1-202ENST00000423271 LSG1Q9H089 658 aaKnown RBP17.68■□□□□ 0.42
USB1-202ENST00000423271 MRPL11Q9Y3B7 192 aaKnown RBP17.68■□□□□ 0.42
USB1-202ENST00000423271 ERICH2A1L162 156 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 TLR3O15455 904 aaKnown RBP17.67■□□□□ 0.42
USB1-202ENST00000423271 ARIH2O95376 493 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 CD4P01730 458 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 COL9A3Q14050 684 aaPredicted RBP17.67■□□□□ 0.42
USB1-202ENST00000423271 WTAPQ15007 396 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 TMEM67Q5HYA8 995 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 HOMER1Q86YM7 354 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 MCF2L2Q86YR7 1114 aa17.67■□□□□ 0.42
USB1-202ENST00000423271 SCFD2Q8WU76 684 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms