RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 ATP1A3P13637 1013 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 RPS12P25398 132 aaKnown RBP10.16□□□□□ -0.78
SNX20-203ENST00000423026 CASP1P29466 404 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 CNTNAP1P78357 1384 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 SEMA3FQ13275 785 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 CCDC144BQ3MJ40 725 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 TMC6Q7Z403 805 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 POTEDQ86YR6 584 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 LRRC8AQ8IWT6 810 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 CCDC47Q96A33 483 aaKnown RBP10.16□□□□□ -0.78
SNX20-203ENST00000423026 HSD3B7Q9H2F3 369 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 MYOZ2Q9NPC6 264 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 CD2APQ9Y5K6 639 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 WNT10BO00744 389 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
SNX20-203ENST00000423026 RPN1P04843 607 aaKnown RBP10.16□□□□□ -0.78
SNX20-203ENST00000423026 FXR2P51116 673 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNX20-203ENST00000423026 AMPD3Q01432 767 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 FMR1Q06787 632 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNX20-203ENST00000423026 CUL4BQ13620 913 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 PDIA5Q14554 519 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 RRP1BQ14684 758 aaKnown RBP10.16□□□□□ -0.78
SNX20-203ENST00000423026 TPD52L1Q16890 204 aaPredicted RBP10.16□□□□□ -0.78
SNX20-203ENST00000423026 SPATA1Q5VX52 437 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 KLHL10Q6JEL2 608 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 BTNL9Q6UXG8 535 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 CACTINQ8WUQ7 758 aaKnown RBP10.16□□□□□ -0.78
SNX20-203ENST00000423026 MTMR9Q96QG7 549 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 NUP88Q99567 741 aaPredicted RBP10.16□□□□□ -0.78
SNX20-203ENST00000423026 TMEM39BQ9GZU3 492 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 DDX25Q9UHL0 483 aaKnown RBP10.16□□□□□ -0.78
SNX20-203ENST00000423026 ZBTB21Q9ULJ3 1066 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 PYCARDQ9ULZ3 195 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 BCS1LQ9Y276 419 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 TMX2Q9Y320 296 aa10.16□□□□□ -0.78
SNX20-203ENST00000423026 SYNRGQ9UMZ2 1314 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 MYH7BA7E2Y1 1941 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 A0A1W2PRG0 241 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 TDP2O95551 362 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 JAG1P78504 1218 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 LRMPQ12912 555 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 AP3B2Q13367 1082 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 TNFAIP1Q13829 316 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 ZNF658Q5TYW1 1059 aaPredicted RBP10.15□□□□□ -0.78
SNX20-203ENST00000423026 TRMT44Q8IYL2 757 aaKnown RBP10.15□□□□□ -0.78
SNX20-203ENST00000423026 IGSF22Q8N9C0 903 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 CCDC150Q8NCX0 1101 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 ZBED3Q96IU2 234 aaPredicted RBP10.15□□□□□ -0.78
SNX20-203ENST00000423026 CDK5RAP3Q96JB5 506 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 PLIN2Q99541 437 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 MTRQ99707 1265 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 KBTBD4Q9NVX7 518 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 LRWD1Q9UFC0 647 aa10.15□□□□□ -0.78
SNX20-203ENST00000423026 BRCA1P38398 1863 aaKnown RBP10.15□□□□□ -0.78
SNX20-203ENST00000423026 SPDYE4A6NLX3 237 aa10.15□□□□□ -0.79
SNX20-203ENST00000423026 FOSP01100 380 aaPredicted RBP10.15□□□□□ -0.79
SNX20-203ENST00000423026 PLCG1P19174 1290 aa10.15□□□□□ -0.79
SNX20-203ENST00000423026 USP11P51784 963 aa10.15□□□□□ -0.79
SNX20-203ENST00000423026 STAT2P52630 851 aa10.15□□□□□ -0.79
SNX20-203ENST00000423026 R3HDM1Q15032 1099 aaKnown RBP10.15□□□□□ -0.79
SNX20-203ENST00000423026 NBPF9Q3BBW0 867 aa10.15□□□□□ -0.79
SNX20-203ENST00000423026 NAALADL2Q58DX5 795 aa10.15□□□□□ -0.79
SNX20-203ENST00000423026 MIGA2Q7L4E1 593 aa10.15□□□□□ -0.79
SNX20-203ENST00000423026 CHURC1Q8WUH1 139 aa10.15□□□□□ -0.79
SNX20-203ENST00000423026 VGLL3A8MV65 326 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 PPP1R3GB7ZBB8 358 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USP17L15C9J2P7 530 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USP17L13C9JLJ4 530 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USP17L11C9JVI0 530 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USP17L18D6R9N7 530 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USP17L22D6RA61 530 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USP17L17D6RBQ6 530 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USP17L19D6RCP7 530 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USP17L20D6RJB6 530 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 NFKBIEO00221 500 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 SLC37A4O43826 429 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 ASNSP08243 561 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 ZNF18P17022 549 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 CAP2P40123 477 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 ECE1P42892 770 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 FAM193AP78312 1265 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USP17L24Q0WX57 530 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 STIM1Q13586 685 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 KCNB1Q14721 858 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USH1GQ495M9 461 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 KRT79Q5XKE5 535 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 USP17L6PQ6QN14 398 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 SPICE1Q8N0Z3 855 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 ANO3Q9BYT9 981 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 CGNQ9P2M7 1197 aaKnown RBP10.14□□□□□ -0.79
SNX20-203ENST00000423026 PRR12Q9ULL5 1215 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 LTBP3Q9NS15 1303 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 SPDYE3A6NKU9 549 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 SKILP12757 684 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 CD44P16070 742 aaKnown RBP10.14□□□□□ -0.79
SNX20-203ENST00000423026 SFPQP23246 707 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNX20-203ENST00000423026 STX17P56962 302 aa10.14□□□□□ -0.79
SNX20-203ENST00000423026 ZNF280AP59817 542 aaPredicted RBP10.14□□□□□ -0.79
SNX20-203ENST00000423026 ZNF771Q7L3S4 317 aaPredicted RBP10.14□□□□□ -0.79
SNX20-203ENST00000423026 TEX2Q8IWB9 1127 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms