RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 CRISPLD2Q9H0B8 497 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 CYP46A1Q9Y6A2 500 aa11.2□□□□□ -0.62
HERC3-204ENST00000422770 PNMA6FA0A0J9YX94 578 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 hCG_1642624A0A1W2PR95 340 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 SNAI1O95863 264 aaPredicted RBP11.19□□□□□ -0.62
HERC3-204ENST00000422770 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
HERC3-204ENST00000422770 EXOSC10Q01780 885 aaKnown RBP11.19□□□□□ -0.62
HERC3-204ENST00000422770 TRAF1Q13077 416 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 ACVR2BQ13705 512 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 SGMS1Q86VZ5 419 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 FBXO16Q8IX29 292 aaPredicted RBP11.19□□□□□ -0.62
HERC3-204ENST00000422770 MSL3Q8N5Y2 521 aaKnown RBP11.19□□□□□ -0.62
HERC3-204ENST00000422770 FANCBQ8NB91 859 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 FGD4Q96M96 766 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 LZTS2Q9BRK4 669 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 UPF3BQ9BZI7 483 aaKnown RBP11.19□□□□□ -0.62
HERC3-204ENST00000422770 ABHD16BQ9H3Z7 469 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 RIOX1Q9H6W3 641 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 XPNPEP3Q9NQH7 507 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 OGDHLQ9ULD0 1010 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 BRPF3Q9ULD4 1205 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 FAM184BQ9ULE4 1060 aa11.19□□□□□ -0.62
HERC3-204ENST00000422770 B4DLN1 442 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 EPB41L2O43491 1005 aaKnown RBP11.18□□□□□ -0.62
HERC3-204ENST00000422770 CYTH3O43739 400 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 PPP1R11O60927 126 aaPredicted RBP11.18□□□□□ -0.62
HERC3-204ENST00000422770 PGK1P00558 417 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 ZNF865P0CJ78 1059 aaPredicted RBP11.18□□□□□ -0.62
HERC3-204ENST00000422770 HOXA13P31271 388 aaPredicted RBP11.18□□□□□ -0.62
HERC3-204ENST00000422770 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
HERC3-204ENST00000422770 RBM25P49756 843 aaKnown RBP11.18□□□□□ -0.62
HERC3-204ENST00000422770 METAP2P50579 478 aaKnown RBP eCLIP11.18□□□□□ -0.62
HERC3-204ENST00000422770 MRPL12P52815 198 aaKnown RBP11.18□□□□□ -0.62
HERC3-204ENST00000422770 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 CCDC144BQ3MJ40 725 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 LHX8Q68G74 356 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 MAMDC4Q6UXC1 1216 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 RUFY3Q7L099 469 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 HEATR3Q7Z4Q2 680 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 SRBD1Q8N5C6 995 aaKnown RBP11.18□□□□□ -0.62
HERC3-204ENST00000422770 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 ARRDC4Q8NCT1 418 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 TBC1D5Q92609 795 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 KCNB2Q92953 911 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 MAP3K14Q99558 947 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 SPZ1Q9BXG8 430 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 C11orf49Q9H6J7 331 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 RBM28Q9NW13 759 aaKnown RBP11.18□□□□□ -0.62
HERC3-204ENST00000422770 NRBP1Q9UHY1 535 aa11.18□□□□□ -0.62
HERC3-204ENST00000422770 MYH7BA7E2Y1 1941 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 C6orf222P0C671 652 aaPredicted RBP11.17□□□□□ -0.62
HERC3-204ENST00000422770 CAPN2P17655 700 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 EIF2AK2P19525 551 aaKnown RBP11.17□□□□□ -0.62
HERC3-204ENST00000422770 ADCYAP1R1P41586 468 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 ARHGEF16Q5VV41 709 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 TMTC3Q6ZXV5 915 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 CUL5Q93034 780 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 MTMR8Q96EF0 704 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 TAAR1Q96RJ0 339 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 RMDN3Q96TC7 470 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
HERC3-204ENST00000422770 SENP6Q9GZR1 1112 aaPredicted RBP11.17□□□□□ -0.62
HERC3-204ENST00000422770 SPC25Q9HBM1 224 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 PDRG1Q9NUG6 133 aa11.17□□□□□ -0.62
HERC3-204ENST00000422770 TNRC18O15417 2968 aaPredicted RBP11.17□□□□□ -0.62
HERC3-204ENST00000422770 ASTN1O14525 1302 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 SYNRGQ9UMZ2 1314 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 GCOM1H8Y6P7 765 aaPredicted RBP11.16□□□□□ -0.62
HERC3-204ENST00000422770 EVI5O60447 810 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 IGHA2P01877 340 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 POLR2MP0CAP2 368 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 MYCLP12524 364 aaPredicted RBP11.16□□□□□ -0.62
HERC3-204ENST00000422770 ATN1P54259 1190 aaPredicted RBP11.16□□□□□ -0.62
HERC3-204ENST00000422770 ANAPC15P60006 121 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 TNFAIP2Q03169 654 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 STK3Q13188 491 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 RNF180Q86T96 592 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 C7orf61Q8IZ16 206 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 DNERQ8NFT8 737 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 SMARCC2Q8TAQ2 1214 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 SYTL5Q8TDW5 730 aaPredicted RBP11.16□□□□□ -0.62
HERC3-204ENST00000422770 NSUN6Q8TEA1 469 aaKnown RBP11.16□□□□□ -0.62
HERC3-204ENST00000422770 GPKOWQ92917 476 aaPredicted RBP eCLIP11.16□□□□□ -0.62
HERC3-204ENST00000422770 FERMT2Q96AC1 680 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 PCDH10Q9P2E7 1040 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 DOCK5Q9H7D0 1870 aa11.16□□□□□ -0.62
HERC3-204ENST00000422770 CNTNAP5Q8WYK1 1306 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 CCDC196A0A1B0GTZ2 297 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.15□□□□□ -0.62
HERC3-204ENST00000422770 DNM1LO00429 736 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 PPFIA3O75145 1194 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 CDC27P30260 824 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 CCT2P78371 535 aaKnown RBP11.15□□□□□ -0.62
HERC3-204ENST00000422770 AKAP17AQ02040 695 aaKnown RBP11.15□□□□□ -0.62
HERC3-204ENST00000422770 RABEP1Q15276 862 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 LRRC41Q15345 812 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 SEPT14Q6ZU15 432 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 RGS22Q8NE09 1264 aa11.15□□□□□ -0.62
HERC3-204ENST00000422770 VTI1AQ96AJ9 217 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms