RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SNED1Q8TER0 1413 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 DDX60LQ5H9U9 1706 aaKnown RBP17.64■□□□□ 0.41
CDH1-202ENST00000422392 ZNF263O14978 683 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 EPHB6O15197 1021 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 BTDP43251 543 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 DYMQ7RTS9 669 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 NEK8Q86SG6 692 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 EXOC4Q96A65 974 aa17.64■□□□□ 0.41
CDH1-202ENST00000422392 COL24A1Q17RW2 1714 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 PDE2AO00408 941 aaPredicted RBP17.63■□□□□ 0.41
CDH1-202ENST00000422392 KRT86O43790 486 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 RPS6KA4O75676 772 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 KRT83P78385 493 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 BARGINQ6ZT62 677 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 ARHGEF1Q92888 912 aaKnown RBP17.63■□□□□ 0.41
CDH1-202ENST00000422392 CEP95Q96GE4 821 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 ZFP91Q96JP5 570 aaPredicted RBP17.63■□□□□ 0.41
CDH1-202ENST00000422392 RTFDC1Q9BY42 306 aaPredicted RBP17.63■□□□□ 0.41
CDH1-202ENST00000422392 ZNHIT6Q9NWK9 470 aaKnown RBP17.63■□□□□ 0.41
CDH1-202ENST00000422392 AHDC1Q5TGY3 1603 aaPredicted RBP17.63■□□□□ 0.41
CDH1-202ENST00000422392 EIF3JO75822 258 aaKnown RBP17.63■□□□□ 0.41
CDH1-202ENST00000422392 CYLC1P35663 651 aaPredicted RBP17.63■□□□□ 0.41
CDH1-202ENST00000422392 USP14P54578 494 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 IRX5P78411 483 aaPredicted RBP17.63■□□□□ 0.41
CDH1-202ENST00000422392 ZBED6P86452 979 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 KRT25Q7Z3Z0 450 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 C7orf25Q9BPX7 421 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 FAM207AQ9NSI2 230 aaPredicted RBP17.63■□□□□ 0.41
CDH1-202ENST00000422392 LRWD1Q9UFC0 647 aa17.63■□□□□ 0.41
CDH1-202ENST00000422392 FRMPD2Q68DX3 1309 aaPredicted RBP17.62■□□□□ 0.41
CDH1-202ENST00000422392 BICDL2A1A5D9 508 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 USP17L5A8MUK1 530 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 ATP2B2Q01814 1243 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 PAPD7Q5XG87 772 aaKnown RBP17.62■□□□□ 0.41
CDH1-202ENST00000422392 AK8Q96MA6 479 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 DRC1Q96MC2 740 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 SPZ1Q9BXG8 430 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 C6orf50Q9HD87 102 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 JADE2Q9NQC1 790 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 IDEP14735 1019 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 TNNT3P45378 269 aaPredicted RBP17.62■□□□□ 0.41
CDH1-202ENST00000422392 TUBB4BP68371 445 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 RAD51AP2Q09MP3 1159 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 WDR93Q6P2C0 686 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 NOC3LQ8WTT2 800 aaKnown RBP17.62■□□□□ 0.41
CDH1-202ENST00000422392 CCDC47Q96A33 483 aaKnown RBP17.62■□□□□ 0.41
CDH1-202ENST00000422392 COA7Q96BR5 231 aa17.62■□□□□ 0.41
CDH1-202ENST00000422392 RRP36Q96EU6 259 aaKnown RBP17.62■□□□□ 0.41
CDH1-202ENST00000422392 POTEMA6NI47 508 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 IPO7O95373 1038 aaKnown RBP17.61■□□□□ 0.41
CDH1-202ENST00000422392 MYBL2P10244 700 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 C2orf54Q08AI8 447 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 CLEC10AQ8IUN9 316 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 GLIS3Q8NEA6 775 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 CAGE1Q8TC20 777 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 GBP3Q9H0R5 595 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 CUEDC2Q9H467 287 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 SEC63Q9UGP8 760 aaKnown RBP17.61■□□□□ 0.41
CDH1-202ENST00000422392 MYMKA6NI61 221 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 EIF3CLB5ME19 914 aaKnown RBP17.61■□□□□ 0.41
CDH1-202ENST00000422392 SLC37A4O43826 429 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 CAPN2P17655 700 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 EIF6P56537 245 aaKnown RBP17.61■□□□□ 0.41
CDH1-202ENST00000422392 PPP4CP60510 307 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 MRPS25P82663 173 aaKnown RBP17.61■□□□□ 0.41
CDH1-202ENST00000422392 GRB10Q13322 594 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 SOGA3Q5TF21 947 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 TMED8Q6PL24 325 aaPredicted RBP17.61■□□□□ 0.41
CDH1-202ENST00000422392 TEX11Q8IYF3 940 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 GJA10Q969M2 543 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 UIMC1Q96RL1 719 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 EIF3CQ99613 913 aaKnown RBP17.61■□□□□ 0.41
CDH1-202ENST00000422392 NUDT12Q9BQG2 462 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 NUP58Q9BVL2 599 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 BLOC1S4Q9NUP1 217 aa17.61■□□□□ 0.41
CDH1-202ENST00000422392 TDP2O95551 362 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 GNA11P29992 359 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 GSTO1P78417 241 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 REXO1Q8N1G1 1221 aaKnown RBP17.6■□□□□ 0.41
CDH1-202ENST00000422392 RIN2Q8WYP3 895 aaPredicted RBP17.6■□□□□ 0.41
CDH1-202ENST00000422392 RTCBQ9Y3I0 505 aaKnown RBP17.6■□□□□ 0.41
CDH1-202ENST00000422392 CAPN6Q9Y6Q1 641 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 CCDC96Q2M329 555 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 C16orf86Q6ZW13 317 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 C2CD5Q86YS7 1000 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 CALML4Q96GE6 196 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 CCDC42Q96M95 316 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 PSMB7Q99436 277 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 MLXIPQ9HAP2 919 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 ARHGAP20Q9P2F6 1191 aa17.6■□□□□ 0.41
CDH1-202ENST00000422392 GRAPQ13588 217 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 LRRC41Q15345 812 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 HSP90B2PQ58FF3 399 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 CNNM4Q6P4Q7 775 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 ZNF804AQ7Z570 1209 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 FAM114A1Q8IWE2 563 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
CDH1-202ENST00000422392 CCDC155Q8N6L0 562 aa17.59■□□□□ 0.41
CDH1-202ENST00000422392 GRAPLQ8TC17 118 aaPredicted RBP17.59■□□□□ 0.41
CDH1-202ENST00000422392 PNMA5Q96PV4 448 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms