RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ALDH5A1P51649 535 aaPredicted RBP25.48■■□□□ 1.67
TRAF4-204ENST00000422344 ZNF697Q5TEC3 545 aa25.48■■□□□ 1.67
TRAF4-204ENST00000422344 IGDCC4Q8TDY8 1250 aa25.48■■□□□ 1.67
TRAF4-204ENST00000422344 BADQ92934 168 aa25.48■■□□□ 1.67
TRAF4-204ENST00000422344 MTA3Q9BTC8 594 aa25.48■■□□□ 1.67
TRAF4-204ENST00000422344 PHF24Q9UPV7 400 aa25.48■■□□□ 1.67
TRAF4-204ENST00000422344 LOC102724159A0A0B4J2E5 919 aa25.47■■□□□ 1.67
TRAF4-204ENST00000422344 ADAMTS4O75173 837 aa25.47■■□□□ 1.67
TRAF4-204ENST00000422344 RPS6P62753 249 aaKnown RBP25.47■■□□□ 1.67
TRAF4-204ENST00000422344 SNX17Q15036 470 aa25.47■■□□□ 1.67
TRAF4-204ENST00000422344 PWP2Q15269 919 aaKnown RBP25.47■■□□□ 1.67
TRAF4-204ENST00000422344 C9orf50Q5SZB4 431 aa25.47■■□□□ 1.67
TRAF4-204ENST00000422344 NFXL1Q6ZNB6 911 aa25.47■■□□□ 1.67
TRAF4-204ENST00000422344 MCF2L2Q86YR7 1114 aa25.47■■□□□ 1.67
TRAF4-204ENST00000422344 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.47■■□□□ 1.675e-7■■■■■ 32.1
TRAF4-204ENST00000422344 NUP133Q8WUM0 1156 aa25.47■■□□□ 1.67
TRAF4-204ENST00000422344 TMEM87BQ96K49 555 aa25.47■■□□□ 1.67
TRAF4-204ENST00000422344 AMNQ9BXJ7 453 aa25.47■■□□□ 1.67
TRAF4-204ENST00000422344 KATNBL1Q9H079 304 aa25.47■■□□□ 1.67
TRAF4-204ENST00000422344 MRPL11Q9Y3B7 192 aaKnown RBP25.47■■□□□ 1.67
TRAF4-204ENST00000422344 C6orf222P0C671 652 aaPredicted RBP25.46■■□□□ 1.67
TRAF4-204ENST00000422344 TNFAIP2Q03169 654 aa25.46■■□□□ 1.67
TRAF4-204ENST00000422344 TROAPQ12815 778 aa25.46■■□□□ 1.67
TRAF4-204ENST00000422344 EEPD1Q7L9B9 569 aa25.46■■□□□ 1.67
TRAF4-204ENST00000422344 FBXO16Q8IX29 292 aaPredicted RBP25.46■■□□□ 1.67
TRAF4-204ENST00000422344 TMTC2Q8N394 836 aa25.46■■□□□ 1.67
TRAF4-204ENST00000422344 RGS22Q8NE09 1264 aa25.46■■□□□ 1.67
TRAF4-204ENST00000422344 VTA1Q9NP79 307 aa25.46■■□□□ 1.67
TRAF4-204ENST00000422344 PDLIM7Q9NR12 457 aa25.46■■□□□ 1.67
TRAF4-204ENST00000422344 CCDC69A6NI79 296 aa25.45■■□□□ 1.66
TRAF4-204ENST00000422344 B4DLN1 442 aa25.45■■□□□ 1.66
TRAF4-204ENST00000422344 MRPL12P52815 198 aaKnown RBP25.45■■□□□ 1.66
TRAF4-204ENST00000422344 SH3RF1Q7Z6J0 888 aa25.45■■□□□ 1.66
TRAF4-204ENST00000422344 HOMER1Q86YM7 354 aa25.45■■□□□ 1.66
TRAF4-204ENST00000422344 CTCFLQ8NI51 663 aaPredicted RBP25.45■■□□□ 1.66
TRAF4-204ENST00000422344 TSEN34Q9BSV6 310 aaKnown RBP25.45■■□□□ 1.66
TRAF4-204ENST00000422344 COL25A1Q9BXS0 654 aaPredicted RBP25.45■■□□□ 1.66
TRAF4-204ENST00000422344 MAF1Q9H063 256 aa25.45■■□□□ 1.66
TRAF4-204ENST00000422344 LY9Q9HBG7 655 aa25.45■■□□□ 1.66
TRAF4-204ENST00000422344 DDX49Q9Y6V7 483 aaKnown RBP25.45■■□□□ 1.66
TRAF4-204ENST00000422344 LCTP09848 1927 aa25.45■■□□□ 1.66
TRAF4-204ENST00000422344 LRRC37A2A6NM11 1700 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 TRIM43BA6NCK2 446 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 ZBTB5O15062 677 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 DDAH1O94760 285 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 PDE4DQ08499 809 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 TRAF1Q13077 416 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 ERICH6BQ5W0A0 696 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 ZNF654Q8IZM8 581 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 PCSK9Q8NBP7 692 aaKnown RBP25.44■■□□□ 1.66
TRAF4-204ENST00000422344 DNERQ8NFT8 737 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 MORC4Q8TE76 937 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 TRIM43Q96BQ3 446 aaPredicted RBP25.44■■□□□ 1.66
TRAF4-204ENST00000422344 PPP4R2Q9NY27 417 aa25.44■■□□□ 1.66
TRAF4-204ENST00000422344 MYH6P13533 1939 aa25.43■■□□□ 1.66
TRAF4-204ENST00000422344 MOXD2PA6NHM9 499 aa25.43■■□□□ 1.66
TRAF4-204ENST00000422344 SH2B2O14492 632 aaPredicted RBP25.43■■□□□ 1.66
TRAF4-204ENST00000422344 ADCY6O43306 1168 aa25.43■■□□□ 1.66
TRAF4-204ENST00000422344 KIF5BP33176 963 aa25.43■■□□□ 1.66
TRAF4-204ENST00000422344 TLE2Q04725 743 aa25.43■■□□□ 1.66
TRAF4-204ENST00000422344 IQSEC1Q6DN90 963 aa25.43■■□□□ 1.66
TRAF4-204ENST00000422344 KLHDC9Q8NEP7 349 aa25.43■■□□□ 1.66
TRAF4-204ENST00000422344 AP5M1Q9H0R1 490 aa25.43■■□□□ 1.66
TRAF4-204ENST00000422344 UPF3AQ9H1J1 476 aaKnown RBP25.43■■□□□ 1.66
TRAF4-204ENST00000422344 GPHNQ9NQX3 736 aaPredicted RBP25.43■■□□□ 1.66
TRAF4-204ENST00000422344 EYSQ5T1H1 3165 aa25.43■■□□□ 1.66
TRAF4-204ENST00000422344 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.42■■□□□ 1.66
TRAF4-204ENST00000422344 A0A1W2PQ45 241 aaPredicted RBP25.42■■□□□ 1.66
TRAF4-204ENST00000422344 A0A1W2PQY0 241 aa25.42■■□□□ 1.66
TRAF4-204ENST00000422344 ACLYP53396 1101 aa25.42■■□□□ 1.66
TRAF4-204ENST00000422344 GJA9P57773 515 aa25.42■■□□□ 1.66
TRAF4-204ENST00000422344 KCNA10Q16322 511 aa25.42■■□□□ 1.66
TRAF4-204ENST00000422344 C1orf53Q5VUE5 145 aa25.42■■□□□ 1.66
TRAF4-204ENST00000422344 MTMR8Q96EF0 704 aa25.42■■□□□ 1.66
TRAF4-204ENST00000422344 NEK1Q96PY6 1258 aa25.42■■□□□ 1.66
TRAF4-204ENST00000422344 MAP3K14Q99558 947 aa25.42■■□□□ 1.66
TRAF4-204ENST00000422344 CDX2Q99626 313 aaPredicted RBP25.42■■□□□ 1.66
TRAF4-204ENST00000422344 PDGFCQ9NRA1 345 aa25.42■■□□□ 1.66
TRAF4-204ENST00000422344 PCDHA1Q9Y5I3 950 aa25.42■■□□□ 1.66
TRAF4-204ENST00000422344 MYADML2A6NDP7 307 aa25.41■■□□□ 1.66
TRAF4-204ENST00000422344 CST5P28325 142 aaPredicted RBP25.41■■□□□ 1.66
TRAF4-204ENST00000422344 KRT32Q14532 448 aa25.41■■□□□ 1.66
TRAF4-204ENST00000422344 GNASQ5JWF2 1037 aa25.41■■□□□ 1.66
TRAF4-204ENST00000422344 TAPT1Q6NXT6 567 aa25.41■■□□□ 1.66
TRAF4-204ENST00000422344 TLK2Q86UE8 772 aa25.41■■□□□ 1.66
TRAF4-204ENST00000422344 PIGSQ96S52 555 aa25.41■■□□□ 1.66
TRAF4-204ENST00000422344 MYL10Q9BUA6 226 aa25.41■■□□□ 1.66
TRAF4-204ENST00000422344 SEMA6BQ9H3T3 888 aa25.41■■□□□ 1.66
TRAF4-204ENST00000422344 RIOX1Q9H6W3 641 aa25.41■■□□□ 1.66
TRAF4-204ENST00000422344 STARD7Q9NQZ5 370 aa25.41■■□□□ 1.66
TRAF4-204ENST00000422344 CALM1P0DP23 149 aa25.4■■□□□ 1.66
TRAF4-204ENST00000422344 CALM2P0DP24 149 aa25.4■■□□□ 1.66
TRAF4-204ENST00000422344 CALM3P0DP25 149 aa25.4■■□□□ 1.66
TRAF4-204ENST00000422344 SMPD1P17405 629 aa25.4■■□□□ 1.66
TRAF4-204ENST00000422344 LIFRP42702 1097 aa25.4■■□□□ 1.66
TRAF4-204ENST00000422344 SYTL5Q8TDW5 730 aaPredicted RBP25.4■■□□□ 1.66
TRAF4-204ENST00000422344 GLT1D1Q96MS3 346 aa25.4■■□□□ 1.66
TRAF4-204ENST00000422344 SLC12A7Q9Y666 1083 aa25.4■■□□□ 1.66
TRAF4-204ENST00000422344 CFBP00751 764 aa25.39■■□□□ 1.66
TRAF4-204ENST00000422344 GNAQP50148 359 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms