RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 AK8Q96MA6 479 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 TRERF1Q96PN7 1200 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 GTPBP4Q9BZE4 634 aaKnown RBP8.35□□□□□ -1.07
BDNF-209ENST00000420794 RNF146Q9NTX7 359 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 ANKRD31Q8N7Z5 1873 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 COL4A1P02462 1669 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 TKFCQ3LXA3 575 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 CABP7Q86V35 215 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 SNX29Q8TEQ0 813 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 GRPEL1Q9HAV7 217 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 BIN1O00499 593 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 GAS7O60861 476 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 CETPP11597 493 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 TECP42680 631 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 HUNKP57058 714 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 NT5C3AQ9H0P0 336 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 FBXO28Q9NVF7 368 aa8.35□□□□□ -1.07
BDNF-209ENST00000420794 NRXN2Q9P2S2 1712 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 TESPA1A2RU30 521 aaPredicted RBP8.34□□□□□ -1.07
BDNF-209ENST00000420794 POTEB2H3BUK9 544 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 DKC1O60832 514 aaKnown RBP eCLIP8.34□□□□□ -1.07
BDNF-209ENST00000420794 SNHG28P0DPA3 235 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 LIG1P18858 919 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 USP11P51784 963 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 VGLL4Q14135 290 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 NCAPH2Q6IBW4 605 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 SV2BQ7L1I2 683 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 METTL16Q86W50 562 aaKnown RBP8.34□□□□□ -1.07
BDNF-209ENST00000420794 GTF3C2Q8WUA4 911 aaPredicted RBP8.34□□□□□ -1.07
BDNF-209ENST00000420794 ZBED3Q96IU2 234 aaPredicted RBP8.34□□□□□ -1.07
BDNF-209ENST00000420794 L3MBTL3Q96JM7 780 aaPredicted RBP8.34□□□□□ -1.07
BDNF-209ENST00000420794 CLIC6Q96NY7 704 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 ACAD9Q9H845 621 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 MAGEC2Q9UBF1 373 aaPredicted RBP8.34□□□□□ -1.07
BDNF-209ENST00000420794 PPP1R9AQ9ULJ8 1098 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 CYTH3O43739 400 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 PTPREP23469 700 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 ZNF165P49910 485 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 FKBP1BP68106 108 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 TRIM5Q9C035 493 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 CSRNP2Q9H175 543 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 PKD2L1Q9P0L9 805 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 KDM3AQ9Y4C1 1321 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 CNTNAP1P78357 1384 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 NID2Q14112 1375 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 COL2A1P02458 1487 aaPredicted RBP8.34□□□□□ -1.07
BDNF-209ENST00000420794 A0A1W2PRG0 241 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 ICAM1P05362 532 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 TPM1P09493 284 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 GTF2A2P52657 109 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 ARHGAP4P98171 946 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 FILIP1LQ4L180 1135 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 CDAN1Q8IWY9 1227 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 CDHR1Q96JP9 859 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 EXOC1Q9NV70 894 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 TMEM260Q9NX78 707 aa8.34□□□□□ -1.07
BDNF-209ENST00000420794 NR1I2O75469 434 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 CLSTN1O94985 981 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 ZNF157P51786 506 aaPredicted RBP8.33□□□□□ -1.08
BDNF-209ENST00000420794 ASIC1P78348 528 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 ZNF579Q8NAF0 562 aaKnown RBP8.33□□□□□ -1.08
BDNF-209ENST00000420794 GPT2Q8TD30 523 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 ATG4CQ96DT6 458 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 PLIN2Q99541 437 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.33□□□□□ -1.08
BDNF-209ENST00000420794 CACNA1SQ13698 1873 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 CHMP2AO43633 222 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 TBCAO75347 108 aaKnown RBP8.33□□□□□ -1.08
BDNF-209ENST00000420794 PDE4DQ08499 809 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 RASGRP2Q7LDG7 609 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 SAMD3Q8N6K7 520 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 OPTNQ96CV9 577 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 RMDN3Q96TC7 470 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 TEKT3Q9BXF9 490 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 TTC12Q9H892 705 aaPredicted RBP8.33□□□□□ -1.08
BDNF-209ENST00000420794 TMEM63CQ9P1W3 806 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 SNED1Q8TER0 1413 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 CCND2P30279 289 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 NDUFA8P51970 172 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 HIRAP54198 1017 aaPredicted RBP8.33□□□□□ -1.08
BDNF-209ENST00000420794 UBXN2AP68543 259 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 TYRO3Q06418 890 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 FUT2Q10981 343 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 KLHL10Q6JEL2 608 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 BTNL9Q6UXG8 535 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 STXBP4Q6ZWJ1 553 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 NKX2-3Q8TAU0 364 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 NSUN6Q8TEA1 469 aaKnown RBP8.33□□□□□ -1.08
BDNF-209ENST00000420794 BBXQ8WY36 941 aaPredicted RBP8.33□□□□□ -1.08
BDNF-209ENST00000420794 SYMPKQ92797 1274 aaKnown RBP8.33□□□□□ -1.08
BDNF-209ENST00000420794 WDR11Q9BZH6 1224 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 DNM3Q9UQ16 869 aa8.33□□□□□ -1.08
BDNF-209ENST00000420794 CCL15-CCL14A0A0B4J2E2 113 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 BACH1O14867 736 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 PLA2G6O60733 806 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 SETQ01105 290 aaPredicted RBP8.32□□□□□ -1.08
BDNF-209ENST00000420794 CCL15Q16663 113 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 PPP4R3AQ6IN85 833 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 TIGD1Q96MW7 591 aa8.32□□□□□ -1.08
BDNF-209ENST00000420794 ZNF577Q9BSK1 485 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms