RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 CLEC10AQ8IUN9 316 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 PRPF38AQ8NAV1 312 aaKnown RBP10.91□□□□□ -0.66
TRIM39-206ENST00000420746 NKD2Q969F2 451 aaPredicted RBP10.91□□□□□ -0.66
TRIM39-206ENST00000420746 RIOK1Q9BRS2 568 aaKnown RBP10.91□□□□□ -0.66
TRIM39-206ENST00000420746 MTG1Q9BT17 334 aaPredicted RBP10.91□□□□□ -0.66
TRIM39-206ENST00000420746 KANSL2Q9H9L4 492 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 GPR108Q9NPR9 543 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 PIH1D3Q9NQM4 214 aaKnown RBP10.91□□□□□ -0.66
TRIM39-206ENST00000420746 ZNF292O60281 2723 aa10.91□□□□□ -0.66
TRIM39-206ENST00000420746 NCOR2Q9Y618 2525 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 DNAH14Q0VDD8 3507 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 SRGAP3O43295 1099 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 KDM4AO75164 1064 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 EYA4O95677 639 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 EEF2P13639 858 aaKnown RBP10.9□□□□□ -0.66
TRIM39-206ENST00000420746 AKR1B1P15121 316 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 ZAP70P43403 619 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 GPNMBQ14956 572 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 DUSP28Q4G0W2 176 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 TAPT1Q6NXT6 567 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 ADSSL1Q8N142 457 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 VTA1Q9NP79 307 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 GPHNQ9NQX3 736 aaPredicted RBP10.9□□□□□ -0.66
TRIM39-206ENST00000420746 BAHCC1Q9P281 2608 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 MCM3APO60318 1980 aa10.9□□□□□ -0.66
TRIM39-206ENST00000420746 TET1Q8NFU7 2136 aa10.9□□□□□ -0.67
TRIM39-206ENST00000420746 CHD8Q9HCK8 2581 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 KPNA6O60684 536 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 ZBED4O75132 1171 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 SELPP16109 830 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 CNTN2Q02246 1040 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 DDX10Q13206 875 aaKnown RBP10.89□□□□□ -0.67
TRIM39-206ENST00000420746 GPM6BQ13491 265 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 IKBKEQ14164 716 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 FAM47CQ5HY64 1035 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 LRRC8DQ7L1W4 858 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 CNTNAP3BQ96NU0 1288 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 CNTNAP3Q9BZ76 1288 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 LMAN2LQ9H0V9 348 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 SLC38A10Q9HBR0 1119 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 MCM9Q9NXL9 1143 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 CD207Q9UJ71 328 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 NOD1Q9Y239 953 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 CFAP47Q6ZTR5 3102 aa10.89□□□□□ -0.67
TRIM39-206ENST00000420746 SCN10AQ9Y5Y9 1956 aa10.88□□□□□ -0.67
TRIM39-206ENST00000420746 IDH1O75874 414 aaKnown RBP10.88□□□□□ -0.67
TRIM39-206ENST00000420746 DLX2Q07687 328 aaPredicted RBP10.88□□□□□ -0.67
TRIM39-206ENST00000420746 BRDTQ58F21 947 aaPredicted RBP10.88□□□□□ -0.67
TRIM39-206ENST00000420746 NAV1Q8NEY1 1877 aa10.88□□□□□ -0.67
TRIM39-206ENST00000420746 MORC4Q8TE76 937 aa10.88□□□□□ -0.67
TRIM39-206ENST00000420746 RMDN1Q96DB5 314 aa10.88□□□□□ -0.67
TRIM39-206ENST00000420746 CRNKL1Q9BZJ0 848 aaKnown RBP10.88□□□□□ -0.67
TRIM39-206ENST00000420746 ACAD9Q9H845 621 aa10.88□□□□□ -0.67
TRIM39-206ENST00000420746 PDGFCQ9NRA1 345 aa10.88□□□□□ -0.67
TRIM39-206ENST00000420746 CTDP1Q9Y5B0 961 aaPredicted RBP10.88□□□□□ -0.67
TRIM39-206ENST00000420746 WDR87Q6ZQQ6 2873 aa10.88□□□□□ -0.67
TRIM39-206ENST00000420746 TPRP12270 2363 aaKnown RBP10.87□□□□□ -0.67
TRIM39-206ENST00000420746 NBNO60934 754 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 TBX10O75333 385 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 FDX1P10109 184 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 PTGS1P23219 599 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 ICAM3P32942 547 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 EVX2Q03828 476 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 HYAL1Q12794 435 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 MKRN4PQ13434 485 aaPredicted RBP10.87□□□□□ -0.67
TRIM39-206ENST00000420746 PUM1Q14671 1186 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRIM39-206ENST00000420746 SESTD1Q86VW0 696 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 FBXO11Q86XK2 927 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 FBXO16Q8IX29 292 aaPredicted RBP10.87□□□□□ -0.67
TRIM39-206ENST00000420746 CPXCR1Q8N123 301 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 SSH1Q8WYL5 1049 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 MSLNLQ96KJ4 702 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 RAVER2Q9HCJ3 691 aaKnown RBP10.87□□□□□ -0.67
TRIM39-206ENST00000420746 DCP1AQ9NPI6 582 aaPredicted RBP10.87□□□□□ -0.67
TRIM39-206ENST00000420746 COG6Q9Y2V7 657 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 PKD1L2Q7Z442 2459 aa10.87□□□□□ -0.67
TRIM39-206ENST00000420746 CHD6Q8TD26 2715 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 RAD50Q92878 1312 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 LOC102724159A0A0B4J2E5 919 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 MAGEB6P1A0A0J9YX57 407 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 C5orf67F2Z3F1 127 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 AMHP03971 560 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 MYL3P08590 195 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 G3BP1Q13283 466 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRIM39-206ENST00000420746 PWP2Q15269 919 aaKnown RBP10.86□□□□□ -0.67
TRIM39-206ENST00000420746 CLUL1Q15846 466 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 TNNI3KQ59H18 835 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 KIAA1211Q6ZU35 1233 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 TMEM192Q8IY95 271 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 SMRP1Q8NCR6 262 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 RIPOR3Q96MK2 946 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 DBNDD2Q9BQY9 259 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 A1CFQ9NQ94 594 aaKnown RBP10.86□□□□□ -0.67
TRIM39-206ENST00000420746 FPGT-TNNI3KV9GXZ4 949 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 ACACBO00763 2458 aa10.86□□□□□ -0.67
TRIM39-206ENST00000420746 NKRFO15226 690 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRIM39-206ENST00000420746 RB1P06400 928 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 GNAI3P08754 354 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 PTGISQ16647 500 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms