RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 VTA1Q9NP79 307 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 PRDM5Q9NQX1 630 aaPredicted RBP11.23□□□□□ -0.61
CTSA-205ENST00000419493 GPHNQ9NQX3 736 aaPredicted RBP11.23□□□□□ -0.61
CTSA-205ENST00000419493 STARD7Q9NQZ5 370 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 PPP4R2Q9NY27 417 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 PHF24Q9UPV7 400 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 TNRC18O15417 2968 aaPredicted RBP11.23□□□□□ -0.61
CTSA-205ENST00000419493 MKI67P46013 3256 aaKnown RBP11.23□□□□□ -0.61
CTSA-205ENST00000419493 A0A1W2PQ45 241 aaPredicted RBP11.22□□□□□ -0.61
CTSA-205ENST00000419493 A0A1W2PQY0 241 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 MYADML2A6NDP7 307 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 MOXD2PA6NHM9 499 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 ASTN1O14525 1302 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 ADCY6O43306 1168 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 ASGR1P07306 291 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 SMPD1P17405 629 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 KIF5BP33176 963 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 ACLYP53396 1101 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
CTSA-205ENST00000419493 MDM2Q00987 491 aaPredicted RBP11.22□□□□□ -0.61
CTSA-205ENST00000419493 TROAPQ12815 778 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 TRAF1Q13077 416 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 ARHGEF16Q5VV41 709 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 SYNE3Q6ZMZ3 975 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 TLK2Q86UE8 772 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 RGS22Q8NE09 1264 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 ALPK3Q96L96 1907 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 GLT1D1Q96MS3 346 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 TAAR1Q96RJ0 339 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 MTA3Q9BTC8 594 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 KATNBL1Q9H079 304 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 LY9Q9HBG7 655 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 PCDHA1Q9Y5I3 950 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 SLC12A7Q9Y666 1083 aa11.22□□□□□ -0.61
CTSA-205ENST00000419493 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 SH2B2O14492 632 aaPredicted RBP11.21□□□□□ -0.61
CTSA-205ENST00000419493 ZEB2O60315 1214 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 DDAH1O94760 285 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 RXRAP19793 462 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 MAGEA10P43363 369 aaPredicted RBP11.21□□□□□ -0.61
CTSA-205ENST00000419493 GJA9P57773 515 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 FGD1P98174 961 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 BEX3Q00994 111 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
CTSA-205ENST00000419493 TAPT1Q6NXT6 567 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 RAB11FIP4Q86YS3 637 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 KLHDC9Q8NEP7 349 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 MORC4Q8TE76 937 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 NSUN6Q8TEA1 469 aaKnown RBP11.21□□□□□ -0.61
CTSA-205ENST00000419493 RRP36Q96EU6 259 aaKnown RBP11.21□□□□□ -0.61
CTSA-205ENST00000419493 RMDN3Q96TC7 470 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 WDR11Q9BZH6 1224 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 RIOX1Q9H6W3 641 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
CTSA-205ENST00000419493 MYH6P13533 1939 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 PNMA6FA0A0J9YX94 578 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 DCDC2CA8MYV0 355 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 PQBP1O60828 265 aaKnown RBP11.2□□□□□ -0.62
CTSA-205ENST00000419493 CALM1P0DP23 149 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 CALM2P0DP24 149 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 CALM3P0DP25 149 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 CST5P28325 142 aaPredicted RBP11.2□□□□□ -0.62
CTSA-205ENST00000419493 LIFRP42702 1097 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 GNAQP50148 359 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 TLE2Q04725 743 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 KRT32Q14532 448 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 FSCN1Q16658 493 aaKnown RBP11.2□□□□□ -0.62
CTSA-205ENST00000419493 DUSP28Q4G0W2 176 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 SEPT14Q6ZU15 432 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 CCDC82Q8N4S0 544 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 SYTL5Q8TDW5 730 aaPredicted RBP11.2□□□□□ -0.62
CTSA-205ENST00000419493 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 TCEANC2Q96MN5 208 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 MAP3K14Q99558 947 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 GDF15Q99988 308 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 LZTS2Q9BRK4 669 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 UBE2OQ9C0C9 1292 aaKnown RBP11.2□□□□□ -0.62
CTSA-205ENST00000419493 MAF1Q9H063 256 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 UPF3AQ9H1J1 476 aaKnown RBP11.2□□□□□ -0.62
CTSA-205ENST00000419493 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
CTSA-205ENST00000419493 NAP1L2Q9ULW6 460 aaPredicted RBP11.2□□□□□ -0.62
CTSA-205ENST00000419493 GNEQ9Y223 722 aaKnown RBP11.2□□□□□ -0.62
CTSA-205ENST00000419493 Q9Y3F1 56 aa11.2□□□□□ -0.62
CTSA-205ENST00000419493 GCOM1H8Y6P7 765 aaPredicted RBP11.19□□□□□ -0.62
CTSA-205ENST00000419493 CYTH3O43739 400 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 PPP1R11O60927 126 aaPredicted RBP11.19□□□□□ -0.62
CTSA-205ENST00000419493 REC8O95072 547 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 POLR2MP0CAP2 368 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 TXNP10599 105 aaKnown RBP11.19□□□□□ -0.62
CTSA-205ENST00000419493 EIF2AK2P19525 551 aaKnown RBP11.19□□□□□ -0.62
CTSA-205ENST00000419493 PTGS1P23219 599 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
CTSA-205ENST00000419493 COL9A3Q14050 684 aaPredicted RBP11.19□□□□□ -0.62
CTSA-205ENST00000419493 TTLL4Q14679 1199 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 SNX17Q15036 470 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 PPP2R5BQ15173 497 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 STXBP2Q15833 593 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 ADCK5Q3MIX3 580 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms