RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 KRT18P05783 430 aaKnown RBP12.94□□□□□ -0.34
DDR1-232ENST00000418800 VEGFAP15692 232 aaPredicted RBP12.94□□□□□ -0.34
DDR1-232ENST00000418800 CTNNA1P35221 906 aaKnown RBP12.94□□□□□ -0.34
DDR1-232ENST00000418800 HERVK_113P62684 666 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 RASGRF1Q13972 1273 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 KRT71Q3SY84 523 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 TTMPQ5BVD1 217 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 TCERG1LQ5VWI1 586 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 UBA5Q9GZZ9 404 aa12.94□□□□□ -0.34
DDR1-232ENST00000418800 AATFQ9NY61 560 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDR1-232ENST00000418800 PHF20L1A8MW92 1017 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 UQCRFS1P1P0C7P4 283 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 GCFC2P16383 781 aaKnown RBP12.93□□□□□ -0.34
DDR1-232ENST00000418800 SARSP49591 514 aaKnown RBP12.93□□□□□ -0.34
DDR1-232ENST00000418800 CYB5D1Q6P9G0 228 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
DDR1-232ENST00000418800 RNF217Q8TC41 542 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 SPATS2LQ9NUQ6 558 aaKnown RBP12.93□□□□□ -0.34
DDR1-232ENST00000418800 BTG4Q9NY30 223 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 RWDD2AQ9UIY3 292 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 CAPN6Q9Y6Q1 641 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 MPHOSPH10O00566 681 aaKnown RBP12.93□□□□□ -0.34
DDR1-232ENST00000418800 PDE8BO95263 885 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 TXKP42681 527 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 AARSP49588 968 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDR1-232ENST00000418800 DNM2P50570 870 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 MARCH10Q8NA82 808 aaPredicted RBP12.93□□□□□ -0.34
DDR1-232ENST00000418800 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 REXO2Q9Y3B8 237 aaKnown RBP12.93□□□□□ -0.34
DDR1-232ENST00000418800 L3MBTL1Q9Y468 752 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 CD2APQ9Y5K6 639 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 DIP2AQ14689 1571 aa12.93□□□□□ -0.34
DDR1-232ENST00000418800 STARD3NLO95772 234 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 LIFRP42702 1097 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 GYG1P46976 350 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 GFPT1Q06210 699 aaPredicted RBP12.92□□□□□ -0.34
DDR1-232ENST00000418800 ZNF658Q5TYW1 1059 aaPredicted RBP12.92□□□□□ -0.34
DDR1-232ENST00000418800 NELFCDQ8IXH7 590 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 CCDC155Q8N6L0 562 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 KCNV2Q8TDN2 545 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 RPGRIP1Q96KN7 1286 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 DPH5Q9H2P9 285 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 CPDO75976 1380 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 GSG1L2A8MUP6 293 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 FCER1AP12319 257 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 IGHMBP2P38935 993 aaKnown RBP12.92□□□□□ -0.34
DDR1-232ENST00000418800 TECP42680 631 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 MAP2K1Q02750 393 aaPredicted RBP12.92□□□□□ -0.34
DDR1-232ENST00000418800 TRIM58Q8NG06 486 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 MYCBPAPQ8TBZ2 947 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 AP1M1Q9BXS5 423 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 NOVA2Q9UNW9 492 aaKnown RBP12.92□□□□□ -0.34
DDR1-232ENST00000418800 PLAAQ9Y263 795 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 XDHP47989 1333 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 FAM153BP0C7A2 387 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 PAK2Q13177 524 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 UBE3CQ15386 1083 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 FAM153CQ494X1 144 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 FAM43BQ6ZT52 329 aaPredicted RBP12.92□□□□□ -0.34
DDR1-232ENST00000418800 EPN3Q9H201 632 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 RBM12Q9NTZ6 932 aaKnown RBP12.92□□□□□ -0.34
DDR1-232ENST00000418800 FAM153AQ9UHL3 310 aa12.92□□□□□ -0.34
DDR1-232ENST00000418800 KCNK3O14649 394 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 PPP1R12AO14974 1030 aaPredicted RBP12.91□□□□□ -0.34
DDR1-232ENST00000418800 GNPTABQ3T906 1256 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 DDX42Q86XP3 938 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDR1-232ENST00000418800 ARFGAP2Q8N6H7 521 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 MGARPQ8TDB4 240 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 DDX20Q9UHI6 824 aaKnown RBP12.91□□□□□ -0.34
DDR1-232ENST00000418800 ASAP1Q9ULH1 1129 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 PCDHA13Q9Y5I0 950 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 TRAF5O00463 557 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 GKAP1Q5VSY0 366 aaPredicted RBP12.91□□□□□ -0.34
DDR1-232ENST00000418800 CDKAL1Q5VV42 579 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 LBHD1Q9BQE6 289 aaPredicted RBP12.91□□□□□ -0.34
DDR1-232ENST00000418800 HYOU1Q9Y4L1 999 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 CCNT1O60563 726 aaKnown RBP12.91□□□□□ -0.34
DDR1-232ENST00000418800 BMP15O95972 392 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 KIF11P52732 1056 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 CFAP221Q4G0U5 840 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 NOX5Q96PH1 765 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 OSBPL9Q96SU4 736 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 ZSCAN10Q96SZ4 725 aaPredicted RBP12.91□□□□□ -0.34
DDR1-232ENST00000418800 CARD10Q9BWT7 1032 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 IRAK4Q9NWZ3 460 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 SLAIN2Q9P270 581 aa12.91□□□□□ -0.34
DDR1-232ENST00000418800 TPX2Q9ULW0 747 aaKnown RBP12.91□□□□□ -0.34
DDR1-232ENST00000418800 XRN1Q8IZH2 1706 aaKnown RBP12.91□□□□□ -0.34
DDR1-232ENST00000418800 LGALS16A8MUM7 142 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 CASP7P55210 303 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 AMPD2Q01433 879 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 TRADDQ15628 312 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 ARMC3Q5W041 872 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 TRMT1LQ7Z2T5 733 aaKnown RBP12.9□□□□□ -0.34
DDR1-232ENST00000418800 NSMCE1Q8WV22 266 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 ITSN1Q15811 1721 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 CIAO1O76071 339 aa12.9□□□□□ -0.34
DDR1-232ENST00000418800 CACNB1Q02641 598 aaPredicted RBP12.9□□□□□ -0.34
DDR1-232ENST00000418800 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms